RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 SIRPB1O00241 398 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 WDR1O75083 606 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 PSG2P11465 335 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 RPL23AP62750 156 aaKnown RBP13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 STX12Q86Y82 276 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 CYB561D1Q8N8Q1 229 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 PRDM14Q9GZV8 571 aa13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 LYRM2Q9NU23 88 aaPredicted RBP13.61□□□□□ -0.23
ATP2A3-206ENST00000397043 IGKV1-6A0A0C4DH72 117 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 RHBDL1O75783 438 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 ZXDAP98168 799 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 CEACAM21Q3KPI0 293 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 FAM185AQ8N0U4 392 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 LILRB1Q8NHL6 650 aaPredicted RBP13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 APOBEC3DQ96AK3 386 aaPredicted RBP13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 H3BQ15 152 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 GFRA1P56159 465 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 ZNF674Q2M3X9 581 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 LFNGQ8NES3 379 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 OR2M7Q8NG81 312 aa13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
ATP2A3-206ENST00000397043 DOCK11Q5JSL3 2073 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 SSPNQ14714 243 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 OR2B11Q5JQS5 317 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 TECTBQ96PL2 329 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 RSG1Q9BU20 258 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 CEP250Q9BV73 2442 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 A0A0G2JRQ6 117 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 YKT6O15498 198 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 PGLYRP1O75594 196 aaPredicted RBP13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 IFNA5P01569 189 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 METTL15P1P0C7V9 234 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 SELEP16581 610 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 APLNRP35414 380 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 FOXO1Q12778 655 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 OR1C1Q15619 314 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 OR1K1Q8NGR3 316 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 SCRT1Q9BWW7 348 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 PITX3O75364 302 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 IGHEP01854 428 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 PDZD11Q5EBL8 140 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 RAB39BQ96DA2 213 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 ATP23Q9Y6H3 246 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 WSB1Q9Y6I7 421 aa13.59□□□□□ -0.23
ATP2A3-206ENST00000397043 TUSC2O75896 110 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 RPS23P62266 143 aaKnown RBP13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 RAB11AP62491 216 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 DEFB127Q9H1M4 99 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 CACNG5Q9UF02 275 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 OR14J1Q9UGF5 321 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 TRAPPC2LQ9UL33 140 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 GTF3C1Q12789 2109 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 C5orf52A6NGY3 159 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 DEGS1O15121 323 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 CLN3Q13286 438 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 RHEBQ15382 184 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 MPV17LQ2QL34 196 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 NUFIP2Q7Z417 695 aaKnown RBP13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 MED12LQ86YW9 2145 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 TMEM56Q96MV1 263 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 RNF122Q9H9V4 155 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 PRSS50Q9UI38 385 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 TMEM56-RWDD3S4R434 201 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 KIAA1549Q9HCM3 1950 aa13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 CNOT1A5YKK6 2376 aaKnown RBP13.58□□□□□ -0.24
ATP2A3-206ENST00000397043 YIF1AO95070 293 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 NAPSAO96009 420 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 F2RP25116 425 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 RAB2AP61019 212 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 RPS16P62249 146 aaKnown RBP13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 FAM58AQ8N1B3 248 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 SPSB4Q96A44 273 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 FAM173AQ9BQD7 235 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 NEURL1O76050 574 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 ELLP55199 621 aaPredicted RBP13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 NDUFA6P56556 154 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 DLK1P80370 383 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 GPR146Q96CH1 333 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 NIPSNAP3BQ9BS92 247 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 PLSCR2Q9NRY7 297 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 RNF150Q9ULK6 438 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 IFNA17P01571 189 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 LHX2P50458 406 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 SPANXN5Q5MJ07 72 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 LILRB2Q8N423 598 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 CDX2Q99626 313 aaPredicted RBP13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 TTTY12Q9BZ98 90 aa13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 ZNF703Q9H7S9 590 aaPredicted RBP13.57□□□□□ -0.24
ATP2A3-206ENST00000397043 HMGB3O15347 200 aaKnown RBP13.56□□□□□ -0.24
ATP2A3-206ENST00000397043 TLE4Q04727 773 aa13.56□□□□□ -0.24
ATP2A3-206ENST00000397043 ALKBH2Q6NS38 261 aa13.56□□□□□ -0.24
ATP2A3-206ENST00000397043 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms