RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 NSD1Q96L73 2696 aaPredicted RBP13.45□□□□□ -0.26
AP1S3-202ENST00000396653 A0A075B6Q4 140 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 TRAV40A0A0B4J280 105 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 NPIPB11E5RHQ5 1161 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 CD3GP09693 182 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 IGHV1-8P0DP01 117 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 HOXB4P17483 251 aaPredicted RBP13.45□□□□□ -0.26
AP1S3-202ENST00000396653 BPIFB3P59826 476 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 GUCA2AQ02747 115 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 PNLIPRP3Q17RR3 467 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 TMEM30BQ3MIR4 351 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 ZNF260Q3ZCT1 412 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 CHRFAM7AQ494W8 412 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 KLF17Q5JT82 389 aaPredicted RBP13.45□□□□□ -0.26
AP1S3-202ENST00000396653 OR52W1Q6IF63 320 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 OR4K15Q8NH41 348 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 CYYR1Q96J86 154 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 BEX2Q9BXY8 128 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 SLIRPQ9GZT3 109 aaKnown RBP13.45□□□□□ -0.26
AP1S3-202ENST00000396653 SESN1Q9Y6P5 492 aa13.45□□□□□ -0.26
AP1S3-202ENST00000396653 MEX3AA1L020 520 aaKnown RBP13.44□□□□□ -0.26
AP1S3-202ENST00000396653 C15orf65H3BRN8 121 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 XRCC3O43542 346 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 CRLF1O75462 422 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 GNB3P16520 340 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 CDK2P24941 298 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
AP1S3-202ENST00000396653 MRPS15P82914 257 aaKnown RBP13.44□□□□□ -0.26
AP1S3-202ENST00000396653 PITPNAQ00169 270 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 SCGB2A2Q13296 93 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 GPR157Q5UAW9 335 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 CCDC107Q8WV48 283 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 NXF2Q9GZY0 626 aaKnown RBP13.44□□□□□ -0.26
AP1S3-202ENST00000396653 HEXA-AS1Q9H8Q6 139 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 CHMP1AQ9HD42 196 aaPredicted RBP13.44□□□□□ -0.26
AP1S3-202ENST00000396653 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
AP1S3-202ENST00000396653 NAV3Q8IVL0 2385 aa13.44□□□□□ -0.26
AP1S3-202ENST00000396653 CENPVL3A0A0U1RRI6 287 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 RNASEK-C17orf49H0YIS7 233 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 HPGDSO60760 199 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 EIF4EP06730 217 aaKnown RBP13.43□□□□□ -0.26
AP1S3-202ENST00000396653 MELTFP08582 738 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 CD34P28906 385 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 SSTR5P35346 364 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 ARFRP1Q13795 201 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 HMGN3Q15651 99 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 CDNFQ49AH0 187 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 HACD4Q5VWC8 232 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 OLFML2AQ68BL7 652 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 IL17RELQ6ZVW7 336 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 LURAP1LQ8IV03 231 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 LHX4Q969G2 390 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 KIRREL1Q96J84 757 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 HDHD3Q9BSH5 251 aaPredicted RBP13.43□□□□□ -0.26
AP1S3-202ENST00000396653 ZMAT3Q9HA38 289 aaKnown RBP13.43□□□□□ -0.26
AP1S3-202ENST00000396653 IDI2-AS1Q9NZ38 188 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 KCNIP1Q9NZI2 227 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 ADAM30Q9UKF2 790 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 A3GALT2U3KPV4 340 aa13.43□□□□□ -0.26
AP1S3-202ENST00000396653 TRAV18A0A075B6X5 111 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 A0A087X0M5 115 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 TRAV39A0A0B4J263 110 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 A0A1B0GX30 115 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 C12orf77C9JDV5 145 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 F2RL2O00254 374 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 SPINT2O43291 252 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 IGHV4-38-2P0DP08 117 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 SRD5A1P18405 259 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 RCC1P18754 421 aaPredicted RBP13.42□□□□□ -0.26
AP1S3-202ENST00000396653 ELK1P19419 428 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 DTYMKP23919 212 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 UBE2E1P51965 193 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 SRSF7Q16629 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
AP1S3-202ENST00000396653 TMEM69Q5SWH9 247 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 PRAMEF5Q5TYX0 476 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 FOXB2Q5VYV0 432 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 ZNF782Q6ZMW2 699 aaPredicted RBP13.42□□□□□ -0.26
AP1S3-202ENST00000396653 Q6ZPA2 131 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 C9orf139Q6ZV77 190 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 OR52M1Q8NGK5 317 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 OR13D1Q8NGV5 346 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 ARL11Q969Q4 196 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 TMEM133Q9H2Q1 129 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 AUNIPQ9H7T9 357 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 TAF9BQ9HBM6 251 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 Q9N2K0 584 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 BATF3Q9NR55 127 aa13.42□□□□□ -0.26
AP1S3-202ENST00000396653 TEP1Q99973 2627 aaKnown RBP13.41□□□□□ -0.26
AP1S3-202ENST00000396653 IGHV1-69DA0A0B4J2H0 117 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 TMEM235A6NFC5 223 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 A6NHS1 94 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 MMP23AO75900 390 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 TPPPO94811 219 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 IGHV1-69P01742 117 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 FCGR3AP08637 254 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 FAM157CP0CG43 387 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 FPR2P25090 351 aa13.41□□□□□ -0.26
AP1S3-202ENST00000396653 GDNFP39905 211 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms