RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 RIPPLY2Q5TAB7 128 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 SLC25A45Q8N413 288 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 PIGCQ92535 297 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 WNT5BQ9H1J7 359 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 LRFN1Q9P244 771 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 ATP23Q9Y6H3 246 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 RTTNQ86VV8 2226 aa7.46□□□□□ -1.22
BDNF-204ENST00000395980 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 IGKV1D-13A0A0B4J2D9 117 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 KIAA1324LA8MWY0 1029 aaPredicted RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 PGA5P0DJD9 388 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 IGKV1-13P0DP09 117 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 F2RP25116 425 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 LTBRP36941 435 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 RAC3P60763 192 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 FGF12P61328 243 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 PSG4Q00888 419 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 HERPUD1Q15011 391 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 SLC25A26Q70HW3 274 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 CALHM1Q8IU99 346 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 LSM10Q969L4 123 aaKnown RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 RAB24Q969Q5 203 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 ZNF845Q96IR2 970 aaPredicted RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 GPR87Q9BY21 358 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 PRDM14Q9GZV8 571 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 ZNF665Q9H7R5 613 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 RYDENQ9NUL5 291 aaKnown RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 NAT8Q9UHE5 227 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 PCOLCEQ15113 449 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 CYP2G1PQ6ZSU1 146 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 ZNF295-AS1Q8N0V1 137 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 BEND2Q8NDZ0 799 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 NAT6Q93015 286 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 MEGF10Q96KG7 1140 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 CCL28Q9NRJ3 127 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 TP53TG5Q9Y2B4 290 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 SPAG17Q6Q759 2223 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 MYO9BQ13459 2157 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 WDR25Q64LD2 544 aaPredicted RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 ABLIM2Q6H8Q1 611 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 MRPL14Q6P1L8 145 aaKnown RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 CENPVQ7Z7K6 275 aaPredicted RBP7.45□□□□□ -1.22
BDNF-204ENST00000395980 LINC00596Q86U02 117 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 OR4X1Q8NH49 305 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 SNX22Q96L94 193 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 C1QTNF5Q9BXJ0 243 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 SRXN1Q9BYN0 137 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 WDR54Q9H977 334 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 CRLF2Q9HC73 371 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 SH2D2AQ9NP31 389 aa7.45□□□□□ -1.22
BDNF-204ENST00000395980 ZFP92A6NM28 416 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 SCTP09683 121 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 MDH2P40926 338 aaKnown RBP7.44□□□□□ -1.22
BDNF-204ENST00000395980 HBG1P69891 147 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 HBG2P69892 147 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 PDCD1Q15116 288 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 TMEM41BQ5BJD5 291 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 ZNF525Q8N782 197 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 OR1P1Q8NH06 330 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 DNASE2BQ8WZ79 361 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 GPR146Q96CH1 333 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 FOXB1Q99853 325 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 PROK2Q9HC23 129 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 OR14J1Q9UGF5 321 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 TNFSF11O14788 317 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 GCGP01275 180 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 PFN1P07737 140 aaKnown RBP7.44□□□□□ -1.22
BDNF-204ENST00000395980 RPS18P62269 152 aaKnown RBP7.44□□□□□ -1.22
BDNF-204ENST00000395980 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 LRRC75BQ2VPJ9 315 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 NRN1LQ496H8 165 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 TIMM9Q9Y5J7 89 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 ZNF716A6NP11 495 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 AMBPP02760 352 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 CCL3P10147 92 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 B4GALT1P15291 398 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 CDCP2Q5VXM1 449 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 COLCA1Q6ZS62 124 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 NAXEQ8NCW5 288 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 KCNE4Q8WWG9 221 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 TNRC6BQ9UPQ9 1833 aaKnown RBP7.44□□□□□ -1.22
BDNF-204ENST00000395980 MED12Q93074 2177 aa7.44□□□□□ -1.22
BDNF-204ENST00000395980 A8MWP6 167 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 CBR3O75828 277 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 RNF224P0DH78 156 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 MYF5P13349 255 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 EDN3P14138 238 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 PDLIM4P50479 330 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 NCR3LG1Q68D85 454 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 AAED1Q7RTV5 226 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 NDUFAF3Q9BU61 184 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 PLK3Q9H4B4 646 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 EML6Q6ZMW3 1958 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 IGKV1-6A0A0C4DH72 117 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 MAP1LC3B2A6NCE7 125 aa7.43□□□□□ -1.22
BDNF-204ENST00000395980 NPIPB11E5RHQ5 1161 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms