RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 GAPDHP04406 335 aaKnown RBP6.57□□□□□ -1.36
SYNE2-205ENST00000394768 FABP4P15090 132 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 CDAP32320 146 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 NOVP48745 357 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 SOX8P57073 446 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 PRSS8Q16651 343 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 MRPL13Q9BYD1 178 aaKnown RBP6.57□□□□□ -1.36
SYNE2-205ENST00000394768 AUNIPQ9H7T9 357 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 SFT2D2O95562 160 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 NAAAQ02083 359 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM251Q8N6I4 163 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 PLPP2O43688 288 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 HOXB1P14653 301 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-205ENST00000394768 LIMK1P53667 647 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 PSG5Q15238 335 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 OR5AU1Q8NGC0 362 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 TNFRSF19Q9NS68 423 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 VAX2Q9UIW0 290 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 EML2O95834 649 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 APCSP02743 223 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF117Q03924 483 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 C12orf57Q99622 126 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 CCL19Q99731 98 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 OR2W1Q9Y3N9 320 aa6.57□□□□□ -1.36
SYNE2-205ENST00000394768 FABP2P12104 132 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 FAM3BP58499 235 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 KIRREL2Q6UWL6 708 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 CELF2-AS1Q8N7Q2 184 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 AQP10Q96PS8 301 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 IL19Q9UHD0 177 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 STRCQ7RTU9 1775 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 POLEQ07864 2286 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 IGHV1OR21-1A0A087WYE8 117 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PPIAL4DF5H284 164 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PSMG4Q5JS54 123 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 CT55Q8WUE5 264 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF275Q9NSD4 429 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PPIAL4AQ9Y536 164 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 MYOGP15173 224 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 FGF9P31371 208 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ATP5IP56385 69 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 C1orf185Q5T7R7 199 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 FBXW9Q5XUX1 488 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 OR2D3Q8NGH3 330 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 MARS2Q96GW9 593 aaKnown RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 SLC25A20O43772 301 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 HYPMO75409 117 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 HOXA6P31267 233 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 MNX1P50219 401 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 SPRED3Q2MJR0 410 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 OR4A47Q6IF82 309 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 GUSBP11Q6P575 273 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ORAI1Q96D31 301 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ATAD5Q96QE3 1844 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 KCNAB3O43448 404 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 CDS2O95674 445 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PRDX2P32119 198 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 RNFT1Q5M7Z0 435 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 SIGIRRQ6IA17 410 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 NRG4Q8WWG1 115 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 VCX2Q9H322 139 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 DOK5Q9P104 306 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 EDIL3O43854 480 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 CHST1O43916 411 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 SERF2P84101 59 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PAQR9Q6ZVX9 377 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF683Q8IZ20 524 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 A0A1W2PNV4 684 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PCBP3P57721 371 aaKnown RBP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 C12orf54Q6X4T0 127 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF738Q8NE65 137 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ABHD14AQ9BUJ0 271 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 C19orf24Q9BVV8 132 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PARP11Q9NR21 331 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 AHRRA9YTQ3 701 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 B4E171 279 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 HPRT1P00492 218 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PI3P19957 117 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PMELP40967 661 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 STARD6P59095 220 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 FZD5Q13467 585 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 CCSMST1Q4G0I0 132 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 MRGPRGQ86SM5 289 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF680Q8NEM1 530 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 PCGF1Q9BSM1 259 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 GPR27Q9NS67 375 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 RBFOX3A6NFN3 312 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 TIAL1Q01085 375 aaKnown RBP eCLIP6.56□□□□□ -1.36
SYNE2-205ENST00000394768 FAM78BQ5VT40 261 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 DTD1Q8TEA8 209 aa6.56□□□□□ -1.36
SYNE2-205ENST00000394768 HMSDA8MTL9 139 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 FOXH1O75593 365 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms