RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 OR2J1Q9GZK6 312 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 WNT5BQ9H1J7 359 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 PIGLQ9Y2B2 252 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 RCL1Q9Y2P8 373 aaKnown RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 LOC102723996A0A087X1L8 192 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 LOC101059948A0A1B0GTJ6 334 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 RAMP1O60894 148 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 IL2RAP01589 272 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 CDC34P49427 236 aaPredicted RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 CNN1P51911 297 aaKnown RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 WDR25Q64LD2 544 aaPredicted RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 CDC20BQ86Y33 519 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 C1QL4Q86Z23 238 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 MKXQ8IYA7 352 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 OR5AU1Q8NGC0 362 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 OR10C1Q96KK4 312 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 CTDSP1Q9GZU7 261 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 GPR84Q9NQS5 396 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 MDC1Q14676 2089 aaKnown RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 A0A096LPE4 126 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 A0A1W2PPZ6 126 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 PRRG2O14669 202 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 PIN1P1O15428 100 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 EFSO43281 561 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 MPZL1O95297 269 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 UMODP07911 640 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 OR5H8P0DN80 308 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 MGST1P10620 155 aaKnown RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 HLA-DOBP13765 273 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 B4GALT1P15291 398 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 CHRNA7P36544 502 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 MAGEA5P43359 124 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 GLIPR1P48060 266 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 CDPF1Q6NVV7 123 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 BTNL3Q6UXE8 466 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 LINC00114Q6XXX2 140 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 OR10AC1Q8NH08 325 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 OR10J5Q8NHC4 309 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ACY3Q96HD9 319 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 C4orf45Q96LM5 186 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ALKBH3Q96Q83 286 aaPredicted RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 PRDM13Q9H4Q3 707 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 SLC35D1Q9NTN3 355 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 KIAA1456Q9P272 454 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ALPK3Q96L96 1907 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 J3QR89 54 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 NKX2-8O15522 239 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 BPNT1O95861 308 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 CD5P06127 495 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 P2RY1P47900 373 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 AMTP48728 403 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 PIGPP57054 158 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 ZNF121P58317 390 aaPredicted RBP4.96□□□□□ -1.61
RFFL-202ENST00000394597 HBG1P69891 147 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 HBG2P69892 147 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 TBC1D28Q2M2D7 210 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 WDR38Q5JTN6 314 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 OR4A47Q6IF82 309 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 SLC35E3Q7Z769 313 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 OR2D3Q8NGH3 330 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 RTN4IP1Q8WWV3 396 aaPredicted RBP4.96□□□□□ -1.61
RFFL-202ENST00000394597 LIPHQ8WWY8 451 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 NEU1Q99519 415 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 SNHG12Q9BXW3 62 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 BARX1Q9HBU1 254 aaPredicted RBP4.96□□□□□ -1.61
RFFL-202ENST00000394597 PRSS50Q9UI38 385 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 MRM2Q9UI43 246 aaKnown RBP4.96□□□□□ -1.61
RFFL-202ENST00000394597 VAX2Q9UIW0 290 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 ABCA1O95477 2261 aa4.96□□□□□ -1.61
RFFL-202ENST00000394597 A0A0J9YW62 118 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 A0A1W2PPV4 95 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 CD300LBA8K4G0 201 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 DBHP09172 617 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 PMELP40967 661 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 SOX8P57073 446 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 KLF3P57682 345 aaPredicted RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 FAM3BP58499 235 aaPredicted RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 EGR4Q05215 589 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 MZT1Q08AG7 82 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 GGTLC2Q14390 218 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 FAM78BQ5VT40 261 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 BTNL8Q6UX41 500 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 ZNF441Q8N8Z8 693 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 SMIM12Q96EX1 92 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 TMEM100Q9NV29 134 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 FRRS1LQ9P0K9 344 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 PROCRQ9UNN8 238 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 ARL2-SNX15V9GYD0 113 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 FAM221AA4D161 298 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 FAM24AA6NFZ4 105 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 NDUFS8O00217 210 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 RER1O15258 196 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 CEACAM1P13688 526 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 CRISP2P16562 243 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 IL11P20809 199 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 TDGF1P3P51864 188 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 NANOS3P60323 173 aaKnown RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 ERVFRD-1P60508 538 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms