RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GPER1Q99527 375 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 MED29Q9NX70 200 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 FOXJ2Q9P0K8 574 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 SYNGR4O95473 234 aa16.27■□□□□ 0.19
HOXC6-202ENST00000394331 RUNX1Q01196 453 aa16.27■□□□□ 0.19
HOXC6-202ENST00000394331 OR10S1Q8NGN2 331 aa16.27■□□□□ 0.19
HOXC6-202ENST00000394331 OR51I2Q9H344 312 aa16.27■□□□□ 0.19
HOXC6-202ENST00000394331 ZNF665Q9H7R5 613 aa16.27■□□□□ 0.19
HOXC6-202ENST00000394331 LIPT2A6NK58 231 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 TCN2P20062 427 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 DTYMKP23919 212 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 FOXL2P58012 376 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 PAFAH1B2P68402 229 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 SLC24A4Q8NFF2 622 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 SVIPQ8NHG7 77 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 SDSLQ96GA7 329 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 TECTBQ96PL2 329 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 SMIM7Q9BQ49 75 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 SPAG17Q6Q759 2223 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 IGKV1D-43A0A0B4J1Z2 117 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 CLEC18AA5D8T8 446 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 HNF1AP20823 631 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 RPL23P62829 140 aaKnown RBP16.26■□□□□ 0.19
HOXC6-202ENST00000394331 CLEC18CQ8NCF0 446 aa16.26■□□□□ 0.19
HOXC6-202ENST00000394331 CHTOPQ9Y3Y2 248 aaKnown RBP16.26■□□□□ 0.19
HOXC6-202ENST00000394331 NXPH2O95156 264 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 TOMM40O96008 361 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 TDHQ8IZJ6 230 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 C17orf78Q8N4C9 275 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 OR2D3Q8NGH3 330 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 IFI44Q8TCB0 444 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 C11orf40Q8WZ69 217 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 PCNX3Q9H6A9 2034 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 A0A1W2PNV4 684 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 ESDP10768 282 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 WNT5AP41221 380 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 BIDP55957 195 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 RPL15P61313 204 aaKnown RBP16.25■□□□□ 0.19
HOXC6-202ENST00000394331 TOMM20LQ6UXN7 152 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 RNF138Q8WVD3 245 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 KLRF1Q9NZS2 232 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 KLHL13Q9P2N7 655 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
HOXC6-202ENST00000394331 TMEM250H0YL14 139 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 MSTNO14793 375 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 CCL25O15444 150 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 FOSL2P15408 326 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 ZNF17P17021 662 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 OMGP23515 440 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 KCNIP4Q6PIL6 250 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 TOMM40LQ969M1 308 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 RASL10BQ96S79 203 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 ARID1AO14497 2285 aa16.25■□□□□ 0.19
HOXC6-202ENST00000394331 A0A0C4DFX4 3053 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 H3BML4 177 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 PTTG1IPP53801 180 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 NECAP1Q8NC96 275 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 PSMG3Q9BT73 122 aaPredicted RBP16.24■□□□□ 0.19
HOXC6-202ENST00000394331 VAMP8Q9BV40 100 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 PLSCR2Q9NRY7 297 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 DUXBA0A1W2PPF3 345 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 UCP1P25874 307 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 ATP6V1FQ16864 119 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 SLC25A53Q5H9E4 307 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 WDFY1Q8IWB7 410 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 OR5L1Q8NGL2 311 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 ELOVL1Q9BW60 279 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 UNC13CQ8NB66 2214 aa16.24■□□□□ 0.19
HOXC6-202ENST00000394331 IGKV1-9A0A0C4DH69 117 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 NKX2-6A6NCS4 301 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 PHF1O43189 567 aaPredicted RBP16.23■□□□□ 0.19
HOXC6-202ENST00000394331 MMP23AO75900 390 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 NPBWR2P48146 333 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 TSPO2Q5TGU0 170 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 CRIP3Q6Q6R5 217 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 DOK3Q7L591 496 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 SMIM15Q7Z3B0 74 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 SPEM1Q8N4L4 309 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 TMEM56Q96MV1 263 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 TMEM56-RWDD3S4R434 201 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 SSSCA1O60232 199 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 KISS1Q15726 138 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 ABHD12BQ7Z5M8 362 aaPredicted RBP16.23■□□□□ 0.19
HOXC6-202ENST00000394331 EMC6Q9BV81 110 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 ASXL3Q9C0F0 2248 aa16.23■□□□□ 0.19
HOXC6-202ENST00000394331 CEBPZOSA8MTT3 80 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 NDUFB8O95169 186 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ONECUT2O95948 504 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 UBE2V1Q13404 147 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 BATFQ16520 125 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 MRPL13Q9BYD1 178 aaKnown RBP16.22■□□□□ 0.19
HOXC6-202ENST00000394331 RPRMQ9NS64 109 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 PXMP4Q9Y6I8 212 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ABCA7Q8IZY2 2146 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 CBR3O75828 277 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 TFPI2P48307 235 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 TPPP2P59282 170 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ID3Q02535 119 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 MYBPHQ13203 477 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms