RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 PIGPP57054 158 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 LYZL2Q7Z4W2 148 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 SLC35G3Q8N808 338 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 OR51T1Q8NGJ9 327 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 OR52M1Q8NGK5 317 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 NEK7Q8TDX7 302 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 C22orf15Q8WYQ4 148 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 FAM122AQ96E09 287 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 MRGPRX4Q96LA9 322 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 SHISA8B8ZZ34 492 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 ZNF878C9JN71 531 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 PITX3O75364 302 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 HPNP05981 417 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 DBHP09172 617 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 EPHA1P21709 976 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 CCL1P22362 96 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 BLVRBP30043 206 aaPredicted RBP9.6□□□□□ -0.87
CUX1-204ENST00000393824 RPL23AP62750 156 aaKnown RBP9.6□□□□□ -0.87
CUX1-204ENST00000393824 GNMTQ14749 295 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 FAM90A2PQ658T7 463 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 SPINK14Q6IE38 97 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 LINC00696Q6ZRV3 163 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 MRPL52Q86TS9 123 aaKnown RBP9.6□□□□□ -0.87
CUX1-204ENST00000393824 OR2C3Q8N628 320 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 OR51E1Q8TCB6 317 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 C11orf40Q8WZ69 217 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 ST8SIA1Q92185 356 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 CABLES2Q9BTV7 478 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 HES7Q9BYE0 225 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 GAL3ST2Q9H3Q3 398 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 SH2D2AQ9NP31 389 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 GLRX2Q9NS18 164 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 PLA2G3Q9NZ20 509 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 RFNGQ9Y644 331 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 V9GYS6 101 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 DHRS7CA6NNS2 312 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 M0QZK8 103 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 KLK10O43240 276 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
CUX1-204ENST00000393824 HLA-DOBP13765 273 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 ZNF17P17021 662 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 CARD18P57730 90 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 SP6Q3SY56 376 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 DPPA3Q6W0C5 159 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 OR4D5Q8NGN0 318 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 GNPNAT1Q96EK6 184 aaPredicted RBP9.6□□□□□ -0.87
CUX1-204ENST00000393824 ACY3Q96HD9 319 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 SIGLEC12Q96PQ1 595 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 TM2D1Q9BX74 207 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 CHST11Q9NPF2 352 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 KLRF1Q9NZS2 232 aa9.6□□□□□ -0.87
CUX1-204ENST00000393824 LOC102723971A0A1B0GUV8 181 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 ETV2O00321 342 aaPredicted RBP9.59□□□□□ -0.87
CUX1-204ENST00000393824 SSR4P51571 173 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 SOX8P57073 446 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 PAX5Q02548 391 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 COL10A1Q03692 680 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 TLE4Q04727 773 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 FMODQ06828 376 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 ETFRF1Q6IPR1 90 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 OR10S1Q8NGN2 331 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 NPRL2Q8WTW4 380 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 RTN4IP1Q8WWV3 396 aaPredicted RBP9.59□□□□□ -0.87
CUX1-204ENST00000393824 MSI2Q96DH6 328 aaKnown RBP9.59□□□□□ -0.87
CUX1-204ENST00000393824 HIST1H2AAQ96QV6 131 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 SDF2L1Q9HCN8 221 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 DEPPQ9NTK1 212 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 ATRXP46100 2492 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 TLN1Q9Y490 2541 aaKnown RBP9.59□□□□□ -0.87
CUX1-204ENST00000393824 IGKV1D-43A0A0B4J1Z2 117 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 TP53I11O14683 189 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 CIDEAO60543 219 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 CBR3O75828 277 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.87
CUX1-204ENST00000393824 PGA3P0DJD8 388 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 SUMO3P55854 103 aaPredicted RBP9.59□□□□□ -0.87
CUX1-204ENST00000393824 C1orf194Q5T5A4 169 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 LGI3Q8N145 548 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 ZNF283Q8N7M2 679 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 HAS2Q92819 552 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 GPER1Q99527 375 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 ANGPTL4Q9BY76 406 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 ANXA10Q9UJ72 324 aa9.59□□□□□ -0.87
CUX1-204ENST00000393824 A0A1W2PNV4 684 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 PINLYPA6NC86 204 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 ANKUB1A6NFN9 424 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 FAM24AA6NFZ4 105 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 NEURL1O76050 574 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 IL11P20809 199 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 HNF1AP20823 631 aa9.58□□□□□ -0.88
CUX1-204ENST00000393824 ASCL1P50553 236 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms