RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 MEX3BQ6ZN04 569 aaKnown RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 BEND4Q6ZU67 534 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 DMBX1Q8NFW5 382 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 OR5D13Q8NGL4 314 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 CXXC4Q9H2H0 198 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 C11orf1Q9H5F2 150 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 ASF1BQ9NVP2 202 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 OR5H1A6NKK0 313 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 VDAC1P21796 283 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
MKS1-203ENST00000393120 C11orf53Q8IXP5 236 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 LILRB1Q8NHL6 650 aaPredicted RBP12.1□□□□□ -0.47
MKS1-203ENST00000393120 PLPPR1Q8TBJ4 325 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 ARL11Q969Q4 196 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 DOCK7Q96N67 2140 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
MKS1-203ENST00000393120 EP300Q09472 2414 aaPredicted RBP12.1□□□□□ -0.47
MKS1-203ENST00000393120 H0YL77 283 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 HSD17B6O14756 317 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 MLNRO43193 412 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 GRPP07492 148 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 F2RP25116 425 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 SULT1A2P50226 295 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 GNMTQ14749 295 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 MST1LQ2TV78 715 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 ZNF718Q3SXZ3 478 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 NMSQ5H8A3 153 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 IL34Q6ZMJ4 242 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 TINAGQ9UJW2 476 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 IGHV2OR16-5A0A0B4J2B6 119 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 ZNF705EA8MWA4 302 aaPredicted RBP12.09□□□□□ -0.47
MKS1-203ENST00000393120 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 SIRPB1O00241 398 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 PRR7Q8TB68 274 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 OPN3Q9H1Y3 402 aaPredicted RBP12.09□□□□□ -0.47
MKS1-203ENST00000393120 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 ERRFI1Q9UJM3 462 aaPredicted RBP12.09□□□□□ -0.47
MKS1-203ENST00000393120 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 RCL1Q9Y2P8 373 aaKnown RBP12.09□□□□□ -0.47
MKS1-203ENST00000393120 TMA7Q9Y2S6 64 aaKnown RBP12.09□□□□□ -0.47
MKS1-203ENST00000393120 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
MKS1-203ENST00000393120 BORCS7-ASMTA0A0B4J1R7 106 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 HAND1O96004 215 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 CRYABP02511 175 aaKnown RBP12.08□□□□□ -0.48
MKS1-203ENST00000393120 HEXAP06865 529 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 SLC25A6P12236 298 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 MMP9P14780 707 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 ID3Q02535 119 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 HMGN3Q15651 99 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 TRAPPC2LQ9UL33 140 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
MKS1-203ENST00000393120 GCH1P30793 250 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 NKX2-1P43699 371 aaPredicted RBP12.07□□□□□ -0.48
MKS1-203ENST00000393120 MZT1Q08AG7 82 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 TESK1Q15569 626 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 C3orf36Q3SXR2 165 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 TIMM8AO60220 97 aaPredicted RBP12.07□□□□□ -0.48
MKS1-203ENST00000393120 SEC11BP0C7V7 166 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 PVALBP20472 110 aaPredicted RBP12.07□□□□□ -0.48
MKS1-203ENST00000393120 TIMP3P35625 211 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 Q6ZR03 302 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 GINS3Q9BRX5 216 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
MKS1-203ENST00000393120 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 ADAM20O43506 726 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 IGLV2-14P01704 120 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 SLC35E4Q6ICL7 350 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 RBMXL3Q8N7X1 1067 aaKnown RBP12.06□□□□□ -0.48
MKS1-203ENST00000393120 IL1F10Q8WWZ1 152 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 WFDC1Q9HC57 220 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 PLA2G2EQ9NZK7 142 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 WASF3Q9UPY6 502 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 SPEF1Q9Y4P9 236 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 FAM215AQ9Y5M1 114 aa12.06□□□□□ -0.48
MKS1-203ENST00000393120 TMEM30CPA0ZSE6 113 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 PSPNO60542 156 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 APOC3P02656 99 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 FABP6P51161 128 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 KRTCAP3Q53RY4 240 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 C1orf185Q5T7R7 199 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 BTNL8Q6UX41 500 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 WDR82Q6UXN9 313 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 ACP7Q6ZNF0 438 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 OR2C3Q8N628 320 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 LYPD6BQ8NI32 183 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 C17orf50Q8WW18 174 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms