RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RTP5Q14D33 572 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 TIGITQ495A1 244 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 IGSF11Q5DX21 431 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 COMMD1Q8N668 190 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 C2CD4CQ8TF44 421 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 OR2V2Q96R30 315 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 OR2H2O95918 312 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 CEACAM3P40198 252 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM50BP56557 158 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 MRGPRFQ96AM1 343 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM45BQ96B21 275 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF426Q9BUY5 554 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 CRYM-AS1A6NIL9 109 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 PPP5D1E7EU14 171 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 FAM3AP98173 230 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 IL24Q13007 206 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF154Q13106 437 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 KIAA0141Q14154 515 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-202ENST00000392770 BTNL8Q6UX41 500 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 GPR137Q96N19 417 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 ATP5SQ99766 215 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM147Q9BVK8 224 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF331Q9NQX6 463 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-202ENST00000392770 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 ADRA2AP08913 450 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 VAX1Q5SQQ9 334 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 ETFRF1Q6IPR1 90 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 SSX8Q7RTT4 187 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 GINS3Q9BRX5 216 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 SLC25A10Q9UBX3 287 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-202ENST00000392770 CT45A10P0DMU9 189 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 PPP1CCP36873 323 aaKnown RBP14.34□□□□□ -0.11
SCN3B-202ENST00000392770 POMT1Q9Y6A1 747 aa14.34□□□□□ -0.11
SCN3B-202ENST00000392770 VDAC1P21796 283 aa14.33□□□□□ -0.11
SCN3B-202ENST00000392770 TNXAQ16473 311 aa14.33□□□□□ -0.11
SCN3B-202ENST00000392770 LGALSLQ3ZCW2 172 aaPredicted RBP14.33□□□□□ -0.11
SCN3B-202ENST00000392770 CCL8P80075 99 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 SOX15O60248 233 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 LYPD3O95274 346 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 UBE2V2Q15819 145 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 ELF5Q9UKW6 265 aaPredicted RBP14.33□□□□□ -0.12
SCN3B-202ENST00000392770 COX5BP10606 129 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 TMEM88Q6PEY1 159 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 ZNF826PQ6ZT77 177 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 ZNF429Q86V71 674 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 PPIAL4EA0A075B759 164 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 PPIAL4DF5H284 164 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 PPIAL4FP0DN26 164 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 PJVKQ0ZLH3 352 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 ATP6V1FQ16864 119 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 TPRX1Q8N7U7 411 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 PPIAL4AQ9Y536 164 aa14.33□□□□□ -0.12
SCN3B-202ENST00000392770 SLC25A53Q5H9E4 307 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 HSD17B10Q99714 261 aaKnown RBP14.32□□□□□ -0.12
SCN3B-202ENST00000392770 PRF1P14222 555 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 CEBPDP49716 269 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-202ENST00000392770 ZFP36L1Q07352 338 aaKnown RBP14.32□□□□□ -0.12
SCN3B-202ENST00000392770 OR8G5Q8NG78 346 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 V9GYS6 101 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 A0A1W2PPE3 182 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 ZBTB34Q8NCN2 500 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 LINC00470Q9BZP3 86 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 C7orf66A4D0T2 115 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 MAP1LC3B2A6NCE7 125 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 FNDC7Q5VTL7 733 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 OR52L2PQ8NGH6 319 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 DTD1Q8TEA8 209 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 CHAC2Q8WUX2 184 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 MAP1LC3BQ9GZQ8 125 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 LIPGQ9Y5X9 500 aa14.32□□□□□ -0.12
SCN3B-202ENST00000392770 ENDOGQ14249 297 aaKnown RBP14.32□□□□□ -0.12
SCN3B-202ENST00000392770 A0A1W2PN81 502 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 DHRS7CA6NNS2 312 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 C9orf172C9J069 976 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 CHRNA7P36544 502 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 H3F3AP84243 136 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 ALX4Q9H161 411 aaPredicted RBP14.31□□□□□ -0.12
SCN3B-202ENST00000392770 LOC102723996A0A087X1L8 192 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 SCTP09683 121 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 HOXB1P14653 301 aaPredicted RBP14.31□□□□□ -0.12
SCN3B-202ENST00000392770 FGF8P55075 233 aaPredicted RBP14.31□□□□□ -0.12
SCN3B-202ENST00000392770 ITLN1Q8WWA0 313 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 DIRC2Q96SL1 478 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 CCL13Q99616 98 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 RSPO4Q2I0M5 234 aaPredicted RBP14.31□□□□□ -0.12
SCN3B-202ENST00000392770 OR10G4Q8NGN3 311 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 OR10G9Q8NGN4 311 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 OR10G7Q8NGN6 311 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 DHRS9Q9BPW9 319 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 RTN4RQ9BZR6 473 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 SLC25A22Q9H936 323 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 ATP6V1G2-DDX39BF2Z307 99 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 OR4A8P0C604 315 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 BATFQ16520 125 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 KLF14Q8TD94 323 aaPredicted RBP14.31□□□□□ -0.12
SCN3B-202ENST00000392770 MESP1Q9BRJ9 268 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 TRIM77I1YAP6 450 aa14.31□□□□□ -0.12
SCN3B-202ENST00000392770 CNN1P51911 297 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms