RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 A6NLC8 198 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 PHF1O43189 567 aaPredicted RBP16.94■□□□□ 0.3
PTPN11-202ENST00000392597 PTBP3O95758 552 aaKnown RBP16.94■□□□□ 0.3
PTPN11-202ENST00000392597 RRASP10301 218 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 CD200P41217 278 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 GFRALQ6UXV0 394 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 ACP7Q6ZNF0 438 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 TMEM222Q9H0R3 208 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 MED9Q9NWA0 146 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 OR5AC2Q9NZP5 309 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 OR2W1Q9Y3N9 320 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 TMED3Q9Y3Q3 217 aa16.94■□□□□ 0.3
PTPN11-202ENST00000392597 SMG1Q96Q15 3661 aaKnown RBP16.93■□□□□ 0.3
PTPN11-202ENST00000392597 IGKV1D-13A0A0B4J2D9 117 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 NMBP08949 121 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 IGKV1-13P0DP09 117 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 BMP5P22003 454 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 RPS23P62266 143 aaKnown RBP16.93■□□□□ 0.3
PTPN11-202ENST00000392597 SMIM21Q3B7S5 101 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 ZNF826PQ6ZT77 177 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 C5orf24Q7Z6I8 188 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 CMTM1Q8IZ96 169 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 STOML3Q8TAV4 291 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 RRNAD1Q96FB5 475 aaKnown RBP16.93■□□□□ 0.3
PTPN11-202ENST00000392597 ZNF471Q9BX82 626 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-202ENST00000392597 ELOVL5Q9NYP7 299 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 TRAPPC2LQ9UL33 140 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 IGHV3-64DA0A0J9YX35 117 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 F5H0A9 414 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-202ENST00000392597 IFNL4K9M1U5 179 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 RLN2P04090 185 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 S100GP29377 79 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 LUMP51884 338 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-202ENST00000392597 S100A10P60903 97 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 BEX5Q5H9J7 111 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 PRAMEF6Q5VXH4 476 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 ZNF818PQ6ZRF7 136 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 TBC1D26Q86UD7 250 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 COMMD7Q86VX2 200 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 OR1S1Q8NH92 325 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 TMEM56Q96MV1 263 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 TP53RKQ96S44 253 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 ZFP57Q9NU63 452 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 TMEM56-RWDD3S4R434 201 aa16.93■□□□□ 0.3
PTPN11-202ENST00000392597 A0A0G2JNJ9 132 aa16.92■□□□□ 0.3
PTPN11-202ENST00000392597 KLF3P57682 345 aaPredicted RBP16.92■□□□□ 0.3
PTPN11-202ENST00000392597 SMCO1Q147U7 214 aa16.92■□□□□ 0.3
PTPN11-202ENST00000392597 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
PTPN11-202ENST00000392597 SLC25A32Q9H2D1 315 aa16.92■□□□□ 0.3
PTPN11-202ENST00000392597 Q9UFV3 132 aa16.92■□□□□ 0.3
PTPN11-202ENST00000392597 ZGRF1Q86YA3 2104 aa16.92■□□□□ 0.3
PTPN11-202ENST00000392597 TMEM30CPA0ZSE6 113 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 DEDDO75618 318 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 CFHR2P36980 270 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 FAM27E3Q08E93 113 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 KLRB1Q12918 225 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 LY6DQ14210 128 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 HMGN3Q15651 99 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 MSMPQ1L6U9 139 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 SLC35E4Q6ICL7 350 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 SSX8Q7RTT4 187 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 OR10Z1Q8NGY1 313 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 PCNPQ8WW12 178 aaKnown RBP16.91■□□□□ 0.3
PTPN11-202ENST00000392597 OR14J1Q9UGF5 321 aa16.91■□□□□ 0.3
PTPN11-202ENST00000392597 IGLV3-9A0A075B6K5 115 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 PIGBOS1A0A0B4J2F0 54 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 DUXBA0A1W2PPF3 345 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 WNT9BO14905 357 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 WNT2P09544 360 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 BVESQ8NE79 360 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 OR2Z1Q8NG97 314 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 LILRB1Q8NHL6 650 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-202ENST00000392597 MARVELD3Q96A59 401 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 SHARPINQ9H0F6 387 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 SEBOXQ9HB31 216 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-202ENST00000392597 UFSP2Q9NUQ7 469 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 DUSP13Q9UII6 198 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 UBE2J1Q9Y385 318 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-202ENST00000392597 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-202ENST00000392597 PSPNO60542 156 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 ALKBH2Q6NS38 261 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 FAM90A1Q86YD7 464 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 LHFPL5Q8TAF8 219 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 TMEM171Q8WVE6 324 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
PTPN11-202ENST00000392597 CCL28Q9NRJ3 127 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 CADP27708 2225 aa16.9■□□□□ 0.3
PTPN11-202ENST00000392597 hCG_1807616A0A1W2PRN6 198 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 CDS2O95674 445 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 UCP1P25874 307 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 LRP11Q86VZ4 500 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 PDZD9Q8IXQ8 264 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 IL22RA2Q969J5 263 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 JKAMPQ9P055 326 aa16.89■□□□□ 0.29
PTPN11-202ENST00000392597 A0A1B0GW55 424 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 MSGN1A6NI15 193 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 H0Y980 276 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 C16orf97H3BN30 126 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 HSD17B6O14756 317 aa16.88■□□□□ 0.29
PTPN11-202ENST00000392597 KCNAB3O43448 404 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms