RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 AESQ08117 197 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 OR5M8Q8NGP6 311 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 RNF141Q8WVD5 230 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 PPP1R1CQ8WVI7 109 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 CXXC4Q9H2H0 198 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 ZNF319Q9P2F9 582 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 NUDT19A8MXV4 375 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 CRYBA1P05813 215 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 FABP1P07148 127 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 LURAP1LQ8IV03 231 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 GLYATL2Q8WU03 294 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 TMEM54Q969K7 222 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 RRNAD1Q96FB5 475 aaKnown RBP8.83□□□□□ -1
COL6A3-205ENST00000392004 PHB2Q99623 299 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 TUBD1Q9UJT1 453 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 RAB22AQ9UL26 194 aa8.83□□□□□ -1
COL6A3-205ENST00000392004 MRPS18CQ9Y3D5 142 aaKnown RBP8.83□□□□□ -1
COL6A3-205ENST00000392004 USP24Q9UPU5 2620 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 IGHV1-18A0A0C4DH31 117 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 TERTO14746 1132 aaKnown RBP8.82□□□□□ -1
COL6A3-205ENST00000392004 AADACL3Q5VUY0 350 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 OR4D6Q8NGJ1 314 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 ADGRG7Q96K78 797 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 OCSTAMPQ9BR26 566 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 MRPL37Q9BZE1 423 aaKnown RBP8.82□□□□□ -1
COL6A3-205ENST00000392004 RNF7Q9UBF6 113 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 TRAV20A0A0B4J274 112 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 S100A8P05109 93 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 HOXB5P09067 269 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 SLC25A4P12235 298 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 ADRA2CP18825 462 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 ACKR3P25106 362 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 DHRS7BQ6IAN0 325 aaPredicted RBP8.82□□□□□ -1
COL6A3-205ENST00000392004 WDFY1Q8IWB7 410 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 RGP1Q92546 391 aaPredicted RBP8.82□□□□□ -1
COL6A3-205ENST00000392004 DCUN1D4Q92564 292 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 SLC25A28Q96A46 364 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 TMEM231Q9H6L2 316 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 NIT2Q9NQR4 276 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 SIRT7Q9NRC8 400 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 ELOVL5Q9NYP7 299 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 KCNIP3Q9Y2W7 256 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 hCG_1809904A0A1W2PP81 198 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 A0A1W2PPE2 198 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 A0A1W2PR64 198 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 A0A1W2PRV1 198 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 SYNGR3O43761 229 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 SMPD2O60906 423 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 RHBDL1O75783 438 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 NPBWR2P48146 333 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 ARF6P62330 175 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 DHRS2Q13268 280 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 FAM76BQ5HYJ3 339 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 RTL6Q6ICC9 239 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 ZNRF1Q8ND25 227 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 NICN1Q9BSH3 213 aa8.82□□□□□ -1
COL6A3-205ENST00000392004 MED12LQ86YW9 2145 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 MBD3L4A6NDZ8 208 aaPredicted RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 MBD3L3A6NE82 208 aaPredicted RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 MBD3L5A6NJ08 208 aaPredicted RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 SOCS1O15524 211 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 REG1BP48304 166 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 IL13RA1P78552 427 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 ZNF787Q6DD87 383 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 IGF2-ASQ6U949 168 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 TMEM229BQ8NBD8 167 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 MBD3L2Q8NHZ7 208 aaPredicted RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 GTF3AQ92664 365 aaKnown RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 HDHD3Q9BSH5 251 aaPredicted RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 PLSCR4Q9NRQ2 329 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 PPIAL4EA0A075B759 164 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 DPRXA6NFQ7 191 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 PPIAL4DF5H284 164 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 PPIAL4FP0DN26 164 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 EFNB2P52799 333 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 FAM3AP98173 230 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 KRBOX4Q5JUW0 171 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 FAM209BQ5JX69 171 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 CMTM1Q8IZ96 169 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 TMEM104Q8NE00 496 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 SPSB1Q96BD6 273 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 PPIAL4AQ9Y536 164 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 TEP1Q99973 2627 aaKnown RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 CD8AP01732 235 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 H2AFB1P0C5Y9 115 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 APOBEC3AP31941 199 aaPredicted RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 GLRXP35754 106 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 OR3A1P47881 315 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 SNRPEP62304 92 aaKnown RBP8.81□□□□□ -1
COL6A3-205ENST00000392004 GNB1P62873 340 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 PLA2G7Q13093 441 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 MEF2DQ14814 521 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 C10orf128Q5T292 105 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 GVQW1Q8N7I0 195 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 OR10R2Q8NGX6 335 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 RXFP4Q8TDU9 374 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 PRRT1Q99946 306 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 TCEAL7Q9BRU2 100 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 HRH4Q9H3N8 390 aa8.81□□□□□ -1
COL6A3-205ENST00000392004 MPC1Q9Y5U8 109 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms