RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 PRSS8Q16651 343 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 ATP6V1FQ16864 119 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 COX19Q49B96 90 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 CXorf66Q5JRM2 361 aaPredicted RBP4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 TSPO2Q5TGU0 170 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 HLA-DQA1Q5Y7H0 255 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 KIAA0895LQ68EN5 471 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 TMEM42Q69YG0 159 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 TOMM20LQ6UXN7 152 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 LHFPL2Q6ZUX7 228 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 FAM57BQ71RH2 274 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 TIPARPQ7Z3E1 657 aaKnown RBP4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 RABEPKQ7Z6M1 372 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 DEFB128Q7Z7B8 93 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 UEVLDQ8IX04 471 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 MRPL43Q8N983 215 aaKnown RBP4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 OR56B2PQ8NGI1 322 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 OR1N1Q8NGS0 311 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 OR5B3Q8NH48 314 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 CMTM2Q8TAZ6 248 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 VWCEQ96DN2 955 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 NEIL1Q96FI4 390 aaPredicted RBP4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 LYZL4Q96KX0 146 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 OXGR1Q96P68 337 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 RNF2Q99496 336 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 WWTR1Q9GZV5 400 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 FAM60AQ9NP50 221 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 TMEM9BQ9NQ34 198 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 SLC39A9Q9NUM3 307 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 B3GAT1Q9P2W7 334 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 ZNF391Q9UJN7 358 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 CDC42EP3Q9UKI2 254 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 TRAPPC1Q9Y5R8 145 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 B3GALT1Q9Y5Z6 326 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 LRP4O75096 1905 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 KNL1Q8NG31 2342 aa4.28□□□□□ -1.72
TRAJ4-201ENST00000390533 F5P12259 2224 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 THADAQ6YHU6 1953 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 EXPH5Q8NEV8 1989 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TRBV6-6A0A0A6YYG2 114 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 OTOL1A6NHN0 477 aaPredicted RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 LRRC3CA6NJW4 275 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 SHISA7A6NL88 538 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 A6NNC1 897 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 FAM166BA8MTA8 275 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 NPIPA2E9PIF3 369 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TRAF3IP2O43734 574 aaPredicted RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 CNOT4O95628 575 aaKnown RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 ONECUT2O95948 504 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 NRASP01111 189 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 KRASP01116 189 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 DRD1P21728 446 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 BMP5P22003 454 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TUBG1P23258 451 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 GJA4P35212 333 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 OPRM1P35372 400 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TNFRSF4P43489 277 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 ASCL1P50553 236 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 BLKP51451 505 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 EFNA3P52797 238 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 PTTG1IPP53801 180 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 CLDN15P56746 228 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 FBXW4P57775 412 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 CLRN1P58418 232 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 FXYD4P59646 89 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 CCL7P80098 99 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 MRPS34P82930 218 aaKnown RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 PLCXD2Q0VAA5 305 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 MALLQ13021 153 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 SMAD4Q13485 552 aaKnown RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 CNN3Q15417 329 aaKnown RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 PLPPR5Q32ZL2 321 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 C10orf128Q5T292 105 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 OR8G2PQ6IF36 304 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 ALKBH2Q6NS38 261 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 SLC25A24Q6NUK1 477 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 PSRC1Q6PGN9 363 aaPredicted RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 LCN15Q6UWW0 184 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 Q6ZWC4 215 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 SMIM15Q7Z3B0 74 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 SFTPA1Q8IWL2 248 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 C1orf174Q8IYL3 243 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 ZNF295-AS1Q8N0V1 137 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 GCNT2Q8N0V5 402 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TMEM256Q8N2U0 113 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 PNKDQ8N490 385 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 KLHDC1Q8N7A1 406 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 TMEM217Q8N7C4 229 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 ZNF738Q8NE65 137 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 GJC3Q8NFK1 279 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 CADM4Q8NFZ8 388 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 OR11L1Q8NGX0 322 aa4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 MRPL30Q8TCC3 161 aaKnown RBP4.27□□□□□ -1.73
TRAJ4-201ENST00000390533 RNASE8Q8TDE3 154 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms