RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NAT6Q93015 286 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TESCQ96BS2 214 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CXorf40BQ96DE9 158 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 RMND5BQ96G75 393 aaPredicted RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 C4orf36Q96KX1 117 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 VSTM2LQ96N03 204 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 YPEL4Q96NS1 127 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR5B12Q96R08 314 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR7D2Q96RA2 312 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 NAA11Q9BSU3 229 aaPredicted RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FAAP24Q9BTP7 215 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ACAT2Q9BWD1 397 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CHID1Q9BWS9 393 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 C1QTNF6Q9BXI9 259 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FTHL17Q9BXU8 183 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 MRPL20Q9BYC9 149 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CNFNQ9BYD5 112 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PRRG3Q9BZD7 231 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OR51B6Q9H340 312 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 RMND5AQ9H871 391 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 VAT1LQ9HCJ6 419 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TUFT1Q9NNX1 390 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 HEBP1Q9NRV9 189 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 HOMER3Q9NSC5 361 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 OLA1Q9NTK5 396 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 C14orf105Q9NVL8 296 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FKBP14Q9NWM8 211 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 HRASLS2Q9NWW9 162 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 BFARQ9NZS9 450 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM153AQ9UHL3 310 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TBC1D24Q9ULP9 559 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 SCML1Q9UN30 329 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ING4Q9UNL4 249 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM5Q9Y2B1 443 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 C15orf41Q9Y2V0 281 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 TMEM98Q9Y2Y6 226 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 STRAPQ9Y3F4 350 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 ALG5Q9Y673 324 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 WDR19Q8NEZ3 1342 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PCDH11XQ9BZA7 1347 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 PLXNA4Q9HCM2 1894 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 POLR3AO14802 1390 aaPredicted RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 DMXL1Q9Y485 3027 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 DOCK4Q8N1I0 1966 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 SPENQ96T58 3664 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 SCAF11Q99590 1463 aaKnown RBP-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 CEP170Q5SW79 1584 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 F5P12259 2224 aa-0.74□□□□□ -2.53
TRAJ28-201ENST00000390509 VWA8A3KMH1 1905 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 BAZ2AQ9UIF9 1905 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 DSCAML1Q8TD84 2053 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A087X0M5 115 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TRAV38-1A0A0B4J264 116 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A0D9SFI3 127 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A0G2JMM0 328 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A1B0GX30 115 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A1W2PPB8 328 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A0A1W2PRS3 328 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 A6NDN8 102 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PGPEP1LA6NFU8 196 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC69A6NI79 296 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2AT4A6NND4 320 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CD300LBA8K4G0 201 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LYRM9A8MSI8 78 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 KIR3DP1A8MWS1 328 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 H7BYZ3 331 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LGALS8O00214 317 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CLDN5O00501 218 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 GABRPO00591 440 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TXNDC9O14530 226 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 IFIT3O14879 490 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MYL12BO14950 172 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CCL16O15467 120 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 POLR2DO15514 142 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SGCEO43556 437 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 COX7A2P2O60397 106 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CREBL2O60519 120 aaPredicted RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SPINK4O60575 86 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC16A7O60669 478 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 DIRAS1O95057 198 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CCNB2O95067 398 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 GGPS1O95749 300 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LSM8O95777 96 aaKnown RBP-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 HAND1O96004 215 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 AGTP01019 485 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 NPYP01303 97 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 LTAP01374 205 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 TYMSP04818 313 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 MT1BP07438 61 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 METTL15P1P0C7V9 234 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SCGB1C2P0DMR2 95 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 RALBP11234 206 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 SFTPCP11686 197 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 AKR1C4P17516 323 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PRKACAP17612 351 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 CXCR1P25024 350 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 S100A2P29034 98 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 GNA11P29992 359 aa-0.75□□□□□ -2.53
TRAJ28-201ENST00000390509 PBLDP30039 288 aaPredicted RBP-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms