RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 LOXL3P58215 753 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 RAP1BP61224 184 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 AKR1C1Q04828 323 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 TNFRSF9Q07011 255 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 RBM39Q14498 530 aaKnown RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 IL13RA2Q14627 380 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SGCBQ16585 318 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 IQCJQ1A5X6 159 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 ZNF260Q3ZCT1 412 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 CD300EQ496F6 205 aaPredicted RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 RIPPLY2Q5TAB7 128 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SLC25A26Q70HW3 274 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SLC16A14Q7RTX9 510 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 MEX3DQ86XN8 651 aaKnown RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 ZNF679Q8IYX0 411 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SUMF2Q8NBJ7 301 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 TMEM104Q8NE00 496 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 FAM57AQ8TBR7 257 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 PACRGQ96M98 296 aaPredicted RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SLC6A7Q99884 636 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SRXN1Q9BYN0 137 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 OR51B6Q9H340 312 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 SPACA1Q9HBV2 294 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 CHST11Q9NPF2 352 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 MRM2Q9UI43 246 aaKnown RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 ZNF230Q9UIE0 474 aaPredicted RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 LAMP5Q9UJQ1 280 aa6.42□□□□□ -1.38
TRBV28-201ENST00000390400 MCTS1Q9ULC4 181 aaKnown RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 INTS1Q8N201 2190 aaKnown RBP6.42□□□□□ -1.38
TRBV28-201ENST00000390400 ARHGAP21Q5T5U3 1957 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TRAV27A0A087WT01 109 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 SLC22A20A6NK97 555 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 IFITM10A6NMD0 228 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 AHRRA9YTQ3 701 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 FTCDNL1E5RQL4 147 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 PRRG2O14669 202 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ITGB1BP1O14713 200 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ZNHIT1O43257 154 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 WDR1O75083 606 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 DEDDO75618 318 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 OR6A2O95222 327 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 RENP00797 406 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 IFNA21P01568 189 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TK1P04183 234 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HCKP08631 526 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 RNF224P0DH78 156 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 FCGR2AP12318 317 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 MMP9P14780 707 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 FUT1P19526 365 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 RPL12P30050 165 aaKnown RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 GRPRP30550 384 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 PTGER4P35408 488 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 AQP2P41181 271 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 PDLIM4P50479 330 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 CASP6P55212 293 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 LSM6P62312 80 aaKnown RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 MFGE8Q08431 387 aaPredicted RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TMEM241Q24JQ0 296 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ACOT6Q3I5F7 207 aaPredicted RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 LRRC37A5PQ49AS3 106 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 KHDC3LQ587J8 217 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TMEM225Q6GV28 225 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 FBXW12Q6X9E4 464 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 H1FNTQ75WM6 255 aaPredicted RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 LHFPL1Q86WI0 220 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 LYPD6Q86Y78 171 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 GPR137CQ8N3F9 429 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 LRTM2Q8N967 370 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ST6GALNAC3Q8NDV1 305 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ADPRHL1Q8NDY3 354 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 CCDC54Q8NEL0 328 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 OR10D4PQ8NGN7 298 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 OR13C3Q8NGS6 347 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ZPLD1Q8TCW7 415 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 SECTM1Q8WVN6 248 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TVP23CQ96ET8 276 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ZNF845Q96IR2 970 aaPredicted RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 ADAD1Q96M93 576 aaKnown RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
TRBV28-201ENST00000390400 OR8B4Q96RC9 309 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 TNFRSF13CQ96RJ3 184 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 IMMP2LQ96T52 175 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 P2RX4Q99571 388 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 PRRG4Q9BZD6 226 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 DECR2Q9NUI1 292 aa6.41□□□□□ -1.38
TRBV28-201ENST00000390400 RNF150Q9ULK6 438 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms