RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 C3orf85A0A1B0GTC6 90 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 PHF1O43189 567 aaPredicted RBP21.22■□□□□ 0.99
SHOX2-201ENST00000389589 PSPNO60542 156 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 CASP6P55212 293 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 RAB14P61106 215 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 CMTM1Q8IZ96 169 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 DCUN1D4Q92564 292 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 MRPL24Q96A35 216 aaKnown RBP21.22■□□□□ 0.99
SHOX2-201ENST00000389589 MSI2Q96DH6 328 aaKnown RBP21.22■□□□□ 0.99
SHOX2-201ENST00000389589 C18orf12Q96KH6 178 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 GSKIPQ9P0R6 139 aa21.22■□□□□ 0.99
SHOX2-201ENST00000389589 TLN1Q9Y490 2541 aaKnown RBP21.21■□□□□ 0.99
SHOX2-201ENST00000389589 IGKV1D-13A0A0B4J2D9 117 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 TUBAL3A6NHL2 446 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 ERVH48-1M5A8F1 160 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 B3GALNT1O75752 331 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 IGKV1-13P0DP09 117 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 HMGN3Q15651 99 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 CLLU1Q5K131 121 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 ZNF818PQ6ZRF7 136 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 MEGF10Q96KG7 1140 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 OR2V2Q96R30 315 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 MRPL37Q9BZE1 423 aaKnown RBP21.21■□□□□ 0.99
SHOX2-201ENST00000389589 SEBOXQ9HB31 216 aaPredicted RBP21.21■□□□□ 0.99
SHOX2-201ENST00000389589 KCNIP1Q9NZI2 227 aa21.21■□□□□ 0.99
SHOX2-201ENST00000389589 SRRM5B3KS81 715 aa21.2■□□□□ 0.99
SHOX2-201ENST00000389589 BCL2L11O43521 198 aa21.2■□□□□ 0.99
SHOX2-201ENST00000389589 S100GP29377 79 aa21.2■□□□□ 0.99
SHOX2-201ENST00000389589 TBC1D26Q86UD7 250 aa21.2■□□□□ 0.99
SHOX2-201ENST00000389589 WFDC8Q8IUA0 241 aa21.2■□□□□ 0.99
SHOX2-201ENST00000389589 IL1F10Q8WWZ1 152 aa21.2■□□□□ 0.99
SHOX2-201ENST00000389589 LILRB1Q8NHL6 650 aaPredicted RBP21.2■□□□□ 0.98
SHOX2-201ENST00000389589 GSX2Q9BZM3 304 aa21.2■□□□□ 0.98
SHOX2-201ENST00000389589 IGF2RP11717 2491 aa21.2■□□□□ 0.98
SHOX2-201ENST00000389589 H0YIZ8 118 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 NUP62P37198 522 aaPredicted RBP21.19■□□□□ 0.98
SHOX2-201ENST00000389589 UBA52P62987 128 aaKnown RBP21.19■□□□□ 0.98
SHOX2-201ENST00000389589 RAB32Q13637 225 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 TP53RKQ96S44 253 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 TMEM222Q9H0R3 208 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 TAF9BQ9HBM6 251 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 CCL28Q9NRJ3 127 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 TMED3Q9Y3Q3 217 aa21.19■□□□□ 0.98
SHOX2-201ENST00000389589 TRAV39A0A0B4J263 110 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 LINC00862A6NCI5 91 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 SPRY3O43610 288 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 GATA4P43694 442 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 COL10A1Q03692 680 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 SCARB1Q8WTV0 552 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 ERRFI1Q9UJM3 462 aaPredicted RBP21.18■□□□□ 0.98
SHOX2-201ENST00000389589 ZDHHC8Q9ULC8 765 aa21.18■□□□□ 0.98
SHOX2-201ENST00000389589 UBE2J1Q9Y385 318 aaPredicted RBP21.18■□□□□ 0.98
SHOX2-201ENST00000389589 TRGV8A0A0C4DH27 118 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.17■□□□□ 0.98
SHOX2-201ENST00000389589 HSD17B6O14756 317 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 THBDP07204 575 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 OR3A1P47881 315 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 ESCO2Q56NI9 601 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 LYZL2Q7Z4W2 148 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 OR10V1Q8NGI7 309 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 OR1A1Q9P1Q5 309 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 DNAJB11Q9UBS4 358 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 KIAA2026Q5HYC2 2103 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 PCNX1Q96RV3 2341 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 RPS10-NUDT3A0A1W2PQS6 291 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 OOEPA6NGQ2 149 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 HSPA12AO43301 675 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 PAX5Q02548 391 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 BVESQ8NE79 360 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 TMEM56Q96MV1 263 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 CNTNAP3BQ96NU0 1288 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 CNTNAP3Q9BZ76 1288 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 TMEM56-RWDD3S4R434 201 aa21.17■□□□□ 0.98
SHOX2-201ENST00000389589 DPRXA6NFQ7 191 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 ABCD4O14678 606 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 TNFSF4P23510 183 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 PRDX2P32119 198 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 LUMP51884 338 aaPredicted RBP21.16■□□□□ 0.98
SHOX2-201ENST00000389589 S100A10P60903 97 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 MOGAT3Q86VF5 341 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 PRR18Q8N4B5 295 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 ITLN1Q8WWA0 313 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 OR5AC2Q9NZP5 309 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 IL19Q9UHD0 177 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 KIF25Q9UIL4 384 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 PLCE1Q9P212 2302 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 HEXAP06865 529 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 EGR1P18146 543 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 SMCO1Q147U7 214 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 GCSAMQ8N6F7 178 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 ST6GALNAC3Q8NDV1 305 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 ARPC5LQ9BPX5 153 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 NGBQ9NPG2 151 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 ZFP57Q9NU63 452 aa21.16■□□□□ 0.98
SHOX2-201ENST00000389589 RLN2P04090 185 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 PSG2P11465 335 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 HOXA4Q00056 320 aaPredicted RBP21.15■□□□□ 0.98
SHOX2-201ENST00000389589 AESQ08117 197 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 BEX5Q5H9J7 111 aa21.15■□□□□ 0.98
SHOX2-201ENST00000389589 C6orf183Q5T699 404 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms