RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 KCNE1BA0A087WTH5 132 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 CEACAM3P40198 252 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 ROM1Q03395 351 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 SKP2Q13309 424 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 LINC01465Q8N7H1 131 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 ZNF707Q96C28 371 aaPredicted RBP13.62□□□□□ -0.23
ALK-201ENST00000389048 CD3EP07766 207 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 PPP1CCP36873 323 aaKnown RBP13.62□□□□□ -0.23
ALK-201ENST00000389048 SPATA45Q537H7 98 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 JMJD6Q6NYC1 403 aaPredicted RBP13.62□□□□□ -0.23
ALK-201ENST00000389048 SLC35E3Q7Z769 313 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 PRDM14Q9GZV8 571 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 RELBQ01201 579 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 ZNF343Q6P1L6 599 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 FOXC2Q99958 501 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 MIEN1Q9BRT3 115 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 KLK15Q9H2R5 256 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 OR51B2Q9Y5P1 312 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 EMP1P54849 157 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 COL10A1Q03692 680 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 KHDC3LQ587J8 217 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 Q8WTZ3 238 aa13.62□□□□□ -0.23
ALK-201ENST00000389048 CD99P14209 185 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 GCSAMLQ5JQS6 135 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ZNF385CQ66K41 422 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 BEX4Q9NWD9 120 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 TRAV38-1A0A0B4J264 116 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 M0QZK8 103 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 GGCTO75223 188 aaKnown RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 SMIM6P0DI80 62 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ATOH7Q8N100 152 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 GPHA2Q96T91 129 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ZFP64Q9NPA5 681 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 SLC52A3Q9NQ40 469 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 CTSDP07339 412 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 FAM3BP58499 235 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 COL5A1-AS1Q5SY13 56 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 CARFQ8N187 725 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 M0R296 226 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 HIST1H1BP16401 226 aaKnown RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 FGF9P31371 208 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 C9orf62Q8N4C0 152 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 WDFY2Q96P53 400 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 SCN11AQ9UI33 1791 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 LILRA5A6NI73 299 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 PPYP01298 95 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 LOXL3P58215 753 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 HOXA4Q00056 320 aaPredicted RBP13.61□□□□□ -0.23
ALK-201ENST00000389048 TFF2Q03403 129 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 KLRB1Q12918 225 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 SSPNQ14714 243 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ABLIM2Q6H8Q1 611 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ZNF519Q8TB69 540 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 TAF1P21675 1872 aa13.61□□□□□ -0.23
ALK-201ENST00000389048 ZIC3O60481 467 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 Q5PR19 223 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 SPEM1Q8N4L4 309 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 TRAV8-7A0A075B6U6 113 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 H3BTX0 84 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 FFAR1O14842 300 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 PCP4P48539 62 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 GUCA2BQ16661 112 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 PERPQ96FX8 193 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 MARVELD1Q9BSK0 173 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 PLP1P60201 277 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 CLPPQ16740 277 aaPredicted RBP13.6□□□□□ -0.23
ALK-201ENST00000389048 WDR25Q64LD2 544 aaPredicted RBP13.6□□□□□ -0.23
ALK-201ENST00000389048 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 PGLYRP4Q96LB8 373 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 ANKRD33Q7Z3H0 272 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 A0A1B0GUL6 1792 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 CRHP06850 196 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 FXYD3Q14802 87 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 RPS4Y2Q8TD47 263 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 HSPB9Q9BQS6 159 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 MIXL1Q9H2W2 232 aa13.6□□□□□ -0.23
ALK-201ENST00000389048 KLK2P20151 261 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 NEU1Q99519 415 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 PARD6GQ9BYG4 376 aaPredicted RBP13.59□□□□□ -0.23
ALK-201ENST00000389048 MYH14Q7Z406 1995 aaKnown RBP13.59□□□□□ -0.23
ALK-201ENST00000389048 IL11P20809 199 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 MMDQ15546 238 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 RAB1CQ92928 201 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 KLK13Q9UKR3 277 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 VSIG10L2P0DP72 767 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 CCL4P13236 92 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 DEDDO75618 318 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 CXorf1O96002 111 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 EIF3IQ13347 325 aaKnown RBP13.59□□□□□ -0.23
ALK-201ENST00000389048 PARP11Q9NR21 331 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 K7ERU9 68 aa13.59□□□□□ -0.23
ALK-201ENST00000389048 ISLRO14498 428 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms