RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 DHRS11Q6UWP2 260 aa22.33■■□□□ 1.16
MSX1-201ENST00000382723 LYPD2Q6UXB3 125 aa22.33■■□□□ 1.16
MSX1-201ENST00000382723 TMEM246Q9BRR3 403 aa22.33■■□□□ 1.16
MSX1-201ENST00000382723 UTP20O75691 2785 aaKnown RBP22.32■■□□□ 1.16
MSX1-201ENST00000382723 CLEC18AA5D8T8 446 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 CBX3Q13185 183 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 CLEC18BQ6UXF7 455 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 FGFRL1Q8N441 504 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 CLEC18CQ8NCF0 446 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 OR13A1Q8NGR1 328 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 RAI1Q7Z5J4 1906 aaPredicted RBP22.32■■□□□ 1.16
MSX1-201ENST00000382723 TANC2Q9HCD6 1990 aa22.32■■□□□ 1.16
MSX1-201ENST00000382723 ODAMA1E959 279 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 ADAM20O43506 726 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 NDUFS7O75251 213 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 P2RX3P56373 397 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 PAX5Q02548 391 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 MED30Q96HR3 178 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 DCHS2Q6V1P9 2916 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 VSIG10L2P0DP72 767 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 AVPI1Q5T686 147 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 SLC36A1Q7Z2H8 476 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 PEG10Q86TG7 708 aaKnown RBP22.31■■□□□ 1.16
MSX1-201ENST00000382723 ZDHHC22Q8N966 263 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 SEC22CQ9BRL7 303 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 FAM234AQ9H0X4 552 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 DNTTIP1Q9H147 329 aa22.31■■□□□ 1.16
MSX1-201ENST00000382723 C12orf77C9JDV5 145 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 CTXN2P0C2S0 81 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 FXYD4P59646 89 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 HMGN3Q15651 99 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 KCNJ8Q15842 424 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 CAPSLQ8WWF8 208 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 TOMM40LQ969M1 308 aa22.3■■□□□ 1.16
MSX1-201ENST00000382723 TNFRSF13BO14836 293 aaPredicted RBP22.29■■□□□ 1.16
MSX1-201ENST00000382723 DSCAMO60469 2012 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 PGAM2P15259 253 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 NDUFB7P17568 137 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 AADACP22760 399 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 MECP2P51608 486 aaKnown RBP22.29■■□□□ 1.16
MSX1-201ENST00000382723 SLC23A1Q9UHI7 598 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 PRAF2O60831 178 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 PI3P19957 117 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 FPR2P25090 351 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 MRPS11P82912 194 aaKnown RBP22.29■■□□□ 1.16
MSX1-201ENST00000382723 C6orf183Q5T699 404 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 ADAD2Q8NCV1 583 aaKnown RBP22.29■■□□□ 1.16
MSX1-201ENST00000382723 OR1L1Q8NH94 360 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 OR10J5Q8NHC4 309 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 CABLES2Q9BTV7 478 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 GHITMQ9H3K2 345 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 OR1A1Q9P1Q5 309 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 SLC25A10Q9UBX3 287 aaPredicted RBP22.29■■□□□ 1.16
MSX1-201ENST00000382723 PCDHB10Q9UN67 800 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 LRRK2Q5S007 2527 aa22.29■■□□□ 1.16
MSX1-201ENST00000382723 C7orf66A4D0T2 115 aa22.28■■□□□ 1.16
MSX1-201ENST00000382723 SSTR5P35346 364 aa22.28■■□□□ 1.16
MSX1-201ENST00000382723 C4orf46Q504U0 113 aa22.28■■□□□ 1.16
MSX1-201ENST00000382723 GLDNQ6ZMI3 551 aaPredicted RBP22.28■■□□□ 1.16
MSX1-201ENST00000382723 OR52B4Q8NGK2 314 aa22.28■■□□□ 1.16
MSX1-201ENST00000382723 GPR132Q9UNW8 380 aa22.28■■□□□ 1.16
MSX1-201ENST00000382723 PPIHO43447 177 aaKnown RBP22.27■■□□□ 1.16
MSX1-201ENST00000382723 F12P00748 615 aaPredicted RBP22.27■■□□□ 1.16
MSX1-201ENST00000382723 IGHV2-70P01814 119 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 HBZP02008 142 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 COL8A1P27658 744 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 HERV-K104P61576 105 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 ARL11Q969Q4 196 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 PPP1R14BQ96C90 147 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 FXYD6Q9H0Q3 95 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 CTSZQ9UBR2 303 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 TRBV6-7A0A0A0MS04 114 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 PPYP01298 95 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 METTL11BQ5VVY1 283 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 ZNF565Q8N9K5 539 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 RFESDQ8TAC1 157 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 LURAP1Q96LR2 239 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 SCGB3A2Q96PL1 93 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 OR51J1Q9H342 316 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 C5orf66Q9H5L9 145 aa22.27■■□□□ 1.16
MSX1-201ENST00000382723 CEACAM18A8MTB9 384 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 OVOL3O00110 214 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 HSPA12AO43301 675 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 NDUFB3O43676 98 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 NDUFA2O43678 99 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 DIRAS3O95661 229 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 IL5P05113 134 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 AKR1C4P17516 323 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 ERP29P30040 261 aaKnown RBP22.26■■□□□ 1.15
MSX1-201ENST00000382723 IL2RGP31785 369 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 GALMQ96C23 342 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 CCL19Q99731 98 aa22.26■■□□□ 1.15
MSX1-201ENST00000382723 FAM172BPA6NC97 362 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 FCN3O75636 299 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 OR4E1P0C645 316 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 ZNF728P0DKX0 622 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 EFNA4P52798 201 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 ZNF554Q86TJ5 538 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 MOB3AQ96BX8 217 aa22.25■■□□□ 1.15
MSX1-201ENST00000382723 TIMD4Q96H15 378 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms