RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 SELEP16581 610 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 TUBG1P23258 451 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 MEOX2P50222 304 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 TMEM50BP56557 158 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 PEA15Q15121 130 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 CEACAM21Q3KPI0 293 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 SLC22A25Q6T423 547 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 SSX8Q7RTT4 187 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 OR56B1Q8NGI3 324 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 ARHGAP5-AS1Q96IT6 56 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 S100A13Q99584 98 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
CIITA-202ENST00000381835 NGBQ9NPG2 151 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 TUBG2Q9NRH3 451 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 DNAJB11Q9UBS4 358 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 DUSP13Q9UII6 198 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
CIITA-202ENST00000381835 ABCA4P78363 2273 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 MEX3AA1L020 520 aaKnown RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 TIMM8AO60220 97 aaPredicted RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 HOXB5P09067 269 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 TMEM225BP0DP42 221 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 GLRXP35754 106 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 LPAR6P43657 344 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 NKX6-1P78426 367 aaPredicted RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 FAM76BQ5HYJ3 339 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 RPL7L1Q6DKI1 246 aaKnown RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 PEG10Q86TG7 708 aaKnown RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 FOXRED2Q8IWF2 684 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 C1orf174Q8IYL3 243 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 POC1AQ8NBT0 407 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 OR13G1Q8NGZ3 307 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 CYYR1Q96J86 154 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 C1orf147Q96MC9 270 aaPredicted RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 URM1Q9BTM9 101 aaKnown RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 PKDREJQ9NTG1 2253 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 ZNF732B4DXR9 585 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 AGPAT2O15120 278 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 ANGPTL7O43827 346 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 SFTPBP07988 381 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 GLRA1P23415 457 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 FAM189A2Q15884 450 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 MBNL2Q5VZF2 373 aaKnown RBP10.56□□□□□ -0.72
CIITA-202ENST00000381835 LRP11Q86VZ4 500 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 ZNF843Q8N446 348 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 DMBX1Q8NFW5 382 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 SFT2D1Q8WV19 159 aa10.56□□□□□ -0.72
CIITA-202ENST00000381835 MYO18BQ8IUG5 2567 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 TAAR5O14804 337 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 IFNA4P05014 189 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 RCC1P18754 421 aaPredicted RBP10.55□□□□□ -0.72
CIITA-202ENST00000381835 SERPINA2P20848 420 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 AADACL3Q5VUY0 350 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 ADAM5Q6NVV9 412 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 CALHM1Q8IU99 346 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 OR5A2Q8NGI9 324 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 OR51T1Q8NGJ9 327 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 ITLN2Q8WWU7 325 aaPredicted RBP10.55□□□□□ -0.72
CIITA-202ENST00000381835 OR5P3Q8WZ94 311 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 RBM14Q96PK6 669 aaKnown RBP10.55□□□□□ -0.72
CIITA-202ENST00000381835 SULT4A1Q9BR01 284 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 EHFQ9NZC4 300 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 PRSS44E7EML9 344 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 MFNGO00587 321 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 KITLGP21583 273 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 CD80P33681 288 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 SNU13P55769 128 aaKnown RBP10.55□□□□□ -0.72
CIITA-202ENST00000381835 TFF3Q07654 80 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 RBM39Q14498 530 aaKnown RBP10.55□□□□□ -0.72
CIITA-202ENST00000381835 LHFPL1Q86WI0 220 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 OR8G5Q8NG78 346 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 TMEM171Q8WVE6 324 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 SYT3Q9BQG1 590 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 MSL2Q9HCI7 577 aa10.55□□□□□ -0.72
CIITA-202ENST00000381835 FLNCQ14315 2725 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 IGHV3-64DA0A0J9YX35 117 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 H0YL77 283 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 FBXO24O75426 580 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 CLDN14O95500 239 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 KNG1P01042 644 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 HKR1P10072 659 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 TAS2R46P59540 309 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 RAB5BP61020 215 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 SSTP61278 116 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 RPS23P62266 143 aaKnown RBP10.54□□□□□ -0.72
CIITA-202ENST00000381835 OR8G1Q15617 311 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 BATF2Q8N1L9 274 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 ZNF611Q8N823 705 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 OR10AD1Q8NGE0 317 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 MAFIPQ8WZ33 124 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 PLPPR2Q96GM1 343 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 ATP23Q9Y6H3 246 aa10.54□□□□□ -0.72
CIITA-202ENST00000381835 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
CIITA-202ENST00000381835 COLCA2A8K830 154 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 C1QL1O75973 258 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms