RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TNRC6BQ9UPQ9 1833 aaKnown RBP13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 NBEAQ8NFP9 2946 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 A0A1W2PR80 420 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 PITX3O75364 302 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 EIF2S3P41091 472 aaKnown RBP13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 KIAA0141Q14154 515 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF100Q8IYN0 542 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 TMEM251Q8N6I4 163 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 KDF1Q8NAX2 398 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 CPNE4Q96A23 557 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 ADGRG7Q96K78 797 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 FAM173AQ9BQD7 235 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 TTTY12Q9BZ98 90 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 LYRM2Q9NU23 88 aaPredicted RBP13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 TAGLN2P37802 199 aaKnown RBP13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF266Q14584 549 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 TMEM211Q6ICI0 200 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 CCDC54Q8NEL0 328 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 Q8WTZ3 238 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 IGKV1-6A0A0C4DH72 117 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF816-ZNF321PA0A0X1KG74 233 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 CDS2O95674 445 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 HAAOP46952 286 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 GPM6AP51674 278 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 ERVFRD-1P60508 538 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 OR8B8Q15620 311 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 KRTAP27-1Q3LI81 207 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 HIKESHIQ53FT3 197 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 MYPOPQ86VE0 399 aaPredicted RBP13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 OR56B2PQ8NGI1 322 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 OR51M1Q9H341 326 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 ABI3Q9P2A4 366 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 B4GALT7Q9UBV7 327 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 PTPRZ1P23471 2315 aaPredicted RBP13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 A0A0G2JRQ6 117 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 SLC22A20A6NK97 555 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 SRP19P09132 144 aaKnown RBP13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 PLA2G5P39877 138 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 GFRA1P56159 465 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 VAMP2P63027 116 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 SRSF6Q13247 344 aaKnown RBP13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 ICAM4Q14773 271 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 LFNGQ8NES3 379 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 PLPPR1Q8TBJ4 325 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 TCTEX1D2Q8WW35 142 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 MALSU1Q96EH3 234 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 PLEKHF2Q9H8W4 249 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 IL36GQ9NZH8 169 aa13.91□□□□□ -0.18
NKX3-1-201ENST00000380871 PCSK5Q92824 1860 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 TGIF2-C20orf24A0A0A6YYL0 155 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 CHST1O43916 411 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 DLK1P80370 383 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 IGHV2-70P01814 119 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 NDUFA6P56556 154 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 UBE2KP61086 200 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 PMP22Q01453 160 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 PRR14LQ5THK1 2151 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 NEK7Q8TDX7 302 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF488Q96MN9 340 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 TMEM56Q96MV1 263 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 GGACTQ9BVM4 153 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF703Q9H7S9 590 aaPredicted RBP13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 TMEM56-RWDD3S4R434 201 aa13.9□□□□□ -0.18
NKX3-1-201ENST00000380871 RPL36A-HNRNPH2H7BZ11 118 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 NGFP01138 241 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 PDZD11Q5EBL8 140 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 NMSQ5H8A3 153 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 TINAGQ9UJW2 476 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 DIDO1Q9BTC0 2240 aaKnown RBP13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 LOC400499M0QZD8 3231 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 TK1P04183 234 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 MEOX1P50221 254 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 SPATA46Q5T0L3 261 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 C20orf204Q6ZNR8 217 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF429Q86V71 674 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ASPMQ8IZT6 3477 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF503-AS2A6NEH8 195 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 CYTIPO60759 359 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 IFNA17P01571 189 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 TMEM267Q0VDI3 215 aaPredicted RBP13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ELOBQ15370 118 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF674Q2M3X9 581 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ABLIM2Q6H8Q1 611 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 ZPBPQ9BS86 351 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 Q9N2K0 584 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
NKX3-1-201ENST00000380871 SCAF4O95104 1147 aaKnown RBP13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 MMP7P09237 267 aaPredicted RBP13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 LHX2P50458 406 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 RAB1AP62820 205 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 GFI1BQ5VTD9 330 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 SPNS3Q6ZMD2 512 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 NUFIP2Q7Z417 695 aaKnown RBP13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 TAAR3PQ9P1P4 343 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 A0A1B0GW64 132 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 PAX9P55771 341 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 OR51H1Q8NH63 302 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 TCEAL7Q9BRU2 100 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms