RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TRGV10A0A0A0MS01 117 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 ANKRD37Q7Z713 158 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF683Q8IZ20 524 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 GCM2O75603 506 aaPredicted RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 NUBP1P53384 320 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 CADM4Q8NFZ8 388 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 YAE1D1Q9NRH1 226 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 HS3ST2Q9Y278 367 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 MYH9P35579 1960 aaKnown RBP9.53□□□□□ -0.88
CLCN4-202ENST00000380833 IGKV3D-11A0A0A0MRZ8 115 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 IGKV3-11P04433 115 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 DYNLT3P51808 116 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 HYAL1Q12794 435 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 PLA2G2FQ9BZM2 168 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 CNTRLQ7Z7A1 2325 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 LRRC3CA6NJW4 275 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 NPPBP16860 134 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 MVDP53602 400 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 MRPL58Q14197 206 aaKnown RBP9.53□□□□□ -0.88
CLCN4-202ENST00000380833 MICBQ29980 383 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF260Q3ZCT1 412 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 OR4C13Q8NGP0 309 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 SLC25A33Q9BSK2 321 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 SLC37A1P57057 533 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 TMEM95Q3KNT9 176 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 C16orf52Q8NHV5 167 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 HMGCLL1Q8TB92 370 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 TMEM140Q9NV12 185 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 POLDIP2Q9Y2S7 368 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 A0A1W2PR48 441 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 HBZP02008 142 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 OR4A8P0C604 315 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF415Q09FC8 603 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 CA10Q9NS85 328 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 CHD2O14647 1828 aaKnown RBP9.53□□□□□ -0.88
CLCN4-202ENST00000380833 TRBV9A0A0B4J1U6 114 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF716A6NP11 495 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 HLA-DQA1P01909 254 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 HKR1P10072 659 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 GPX2P18283 190 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF121P58317 390 aaPredicted RBP9.53□□□□□ -0.88
CLCN4-202ENST00000380833 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
CLCN4-202ENST00000380833 ISG20L2Q9H9L3 353 aaKnown RBP9.53□□□□□ -0.88
CLCN4-202ENST00000380833 PGFP49763 221 aa9.52□□□□□ -0.88
CLCN4-202ENST00000380833 ATOH8Q96SQ7 321 aa9.52□□□□□ -0.88
CLCN4-202ENST00000380833 GLRX2Q9NS18 164 aa9.52□□□□□ -0.88
CLCN4-202ENST00000380833 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 NEU3Q9UQ49 428 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 TMPRSS3P57727 454 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 LYZP61626 148 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF79Q15937 498 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 LRRC61Q9BV99 259 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 TMPRSS2O15393 492 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 BCL2P10415 239 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 TIMM23BQ5SRD1 257 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 RABAC1Q9UI14 185 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 FUT7Q11130 342 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 MRPL30Q8TCC3 161 aaKnown RBP9.52□□□□□ -0.89
CLCN4-202ENST00000380833 C20orf141Q9NUB4 165 aa9.52□□□□□ -0.89
CLCN4-202ENST00000380833 FCGR3BO75015 233 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 MPZL1O95297 269 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 OTX1P32242 354 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 CDKN2AP42771 156 aaKnown RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 RPL18Q07020 188 aaKnown RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 CA13Q8N1Q1 262 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 ABHD1Q96SE0 405 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 ST3GAL6Q9Y274 331 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 PPIL1Q9Y3C6 166 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 IGHV3OR16-10A0A075B7F0 116 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 PATE3B3GLJ2 98 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 AMY1AP04745 511 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TDGF1P3P51864 188 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 CD226Q15762 336 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM52BQ4KMG9 183 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 LHFPL2Q6ZUX7 228 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 H1FOOQ8IZA3 346 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 OR2K2Q8NGT1 345 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 NEUROG1Q92886 237 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TAAR6Q96RI8 345 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 MGPP08493 103 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 ORM2P19652 201 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 SSBP2P81877 361 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 ECSCRQ19T08 205 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TUBA4BQ9H853 241 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 MYH15Q9Y2K3 1946 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 A0A1W2PPC4 97 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 F2RL2O00254 374 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 CELA2BP08218 269 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 FCGR3AP08637 254 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TNFAIP6P98066 277 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 GAGE1Q13065 139 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 METRNLQ641Q3 311 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 MYH1P12882 1939 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms