RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TIMM23BQ5SRD1 257 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 ZNF324BQ6AW86 544 aaPredicted RBP19.58■□□□□ 0.73
VPS16-201ENST00000380443 BVESQ8NE79 360 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 ABHD14BQ96IU4 210 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 NUP50Q9UKX7 468 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 WIPI2Q9Y4P8 454 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 ZZEF1O43149 2961 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 FGF16O43320 207 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 TIMM8AO60220 97 aaPredicted RBP19.58■□□□□ 0.72
VPS16-201ENST00000380443 GAPDHP04406 335 aaKnown RBP19.58■□□□□ 0.72
VPS16-201ENST00000380443 GPR157Q5UAW9 335 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 C20orf204Q6ZNR8 217 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 RNF141Q8WVD5 230 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 TP53RKQ96S44 253 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 DMRTA2Q96SC8 542 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 SFXN3Q9BWM7 321 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 ZC4H2Q9NQZ6 224 aa19.58■□□□□ 0.72
VPS16-201ENST00000380443 SHANK1Q9Y566 2161 aa19.57■□□□□ 0.72
VPS16-201ENST00000380443 NUDT19A8MXV4 375 aa19.57■□□□□ 0.72
VPS16-201ENST00000380443 K7ENP7 123 aa19.57■□□□□ 0.72
VPS16-201ENST00000380443 GRPP07492 148 aa19.57■□□□□ 0.72
VPS16-201ENST00000380443 ZNF250P15622 560 aa19.57■□□□□ 0.72
VPS16-201ENST00000380443 LILRB1Q8NHL6 650 aaPredicted RBP19.57■□□□□ 0.72
VPS16-201ENST00000380443 BARX1Q9HBU1 254 aaPredicted RBP19.57■□□□□ 0.72
VPS16-201ENST00000380443 MBNL3Q9NUK0 354 aaKnown RBP19.57■□□□□ 0.72
VPS16-201ENST00000380443 TINAGQ9UJW2 476 aa19.57■□□□□ 0.72
VPS16-201ENST00000380443 ST8SIA3O43173 380 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 MLNRO43193 412 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 KCNAB3O43448 404 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 MBPP02686 304 aaPredicted RBP19.56■□□□□ 0.72
VPS16-201ENST00000380443 UCP1P25874 307 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 TMEM268Q5VZI3 342 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 ZNF818PQ6ZRF7 136 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 ZNF695Q8IW36 515 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 PRR7Q8TB68 274 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 TAAR3PQ9P1P4 343 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 SPEF1Q9Y4P9 236 aa19.56■□□□□ 0.72
VPS16-201ENST00000380443 LSM5Q9Y4Y9 91 aaKnown RBP19.56■□□□□ 0.72
VPS16-201ENST00000380443 H0Y980 276 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 JTBO76095 146 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 P2RY1P47900 373 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 FAM57AQ8TBR7 257 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 AKR1E2Q96JD6 320 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 FAM215AQ9Y5M1 114 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 H0YL77 283 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 SIRPB1O00241 398 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 HAND1O96004 215 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 FAM74A1Q5RGS3 127 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 FAM180AQ6UWF9 173 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 SLC35G3Q8N808 338 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 OR5D13Q8NGL4 314 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 OR4D5Q8NGN0 318 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 PIGMQ9H3S5 423 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 TRAPPC2LQ9UL33 140 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 ESPL1Q14674 2120 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 USP24Q9UPU5 2620 aa19.55■□□□□ 0.72
VPS16-201ENST00000380443 IGKV1D-13A0A0B4J2D9 117 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 CLEC18AA5D8T8 446 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.54■□□□□ 0.72
VPS16-201ENST00000380443 IGKV1-13P0DP09 117 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 RCC1P18754 421 aaPredicted RBP19.54■□□□□ 0.72
VPS16-201ENST00000380443 CEACAM8P31997 349 aaPredicted RBP19.54■□□□□ 0.72
VPS16-201ENST00000380443 FOXRED2Q8IWF2 684 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 C11orf53Q8IXP5 236 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 SELENOHQ8IZQ5 122 aaKnown RBP19.54■□□□□ 0.72
VPS16-201ENST00000380443 CLEC18CQ8NCF0 446 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 LHFPL5Q8TAF8 219 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 CCL28Q9NRJ3 127 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 POMT1Q9Y6A1 747 aa19.54■□□□□ 0.72
VPS16-201ENST00000380443 IFNL4K9M1U5 179 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 GPR137BO60478 399 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 UQCC3Q6UW78 93 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 PLPPR1Q8TBJ4 325 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 RAB19A4D1S5 217 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 PGLYRP1O75594 196 aaPredicted RBP19.53■□□□□ 0.72
VPS16-201ENST00000380443 SCGB1D2O95969 90 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 M6PRP20645 277 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 VDAC1P21796 283 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 GNMTQ14749 295 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 HMGN3Q15651 99 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 SLC35E4Q6ICL7 350 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 MEX3BQ6ZN04 569 aaKnown RBP19.53■□□□□ 0.72
VPS16-201ENST00000380443 OR10V1Q8NGI7 309 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 MUCL1Q96DR8 90 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 PRORYQ9H606 182 aa19.53■□□□□ 0.72
VPS16-201ENST00000380443 SEBOXQ9HB31 216 aaPredicted RBP19.53■□□□□ 0.72
VPS16-201ENST00000380443 TMEM30CPA0ZSE6 113 aa19.52■□□□□ 0.72
VPS16-201ENST00000380443 HSD17B6O14756 317 aa19.52■□□□□ 0.72
VPS16-201ENST00000380443 CRYZL1O95825 349 aa19.52■□□□□ 0.72
VPS16-201ENST00000380443 FABP6P51161 128 aa19.52■□□□□ 0.72
VPS16-201ENST00000380443 SAT2Q96F10 170 aaPredicted RBP19.52■□□□□ 0.72
VPS16-201ENST00000380443 USB1Q9BQ65 265 aaKnown RBP19.52■□□□□ 0.72
VPS16-201ENST00000380443 KCNIP1Q9NZI2 227 aa19.52■□□□□ 0.72
VPS16-201ENST00000380443 F2RP25116 425 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 IGFBP7Q16270 282 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 ZNF474Q6S9Z5 364 aaPredicted RBP19.51■□□□□ 0.71
VPS16-201ENST00000380443 ACP7Q6ZNF0 438 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 STPG2Q8N412 459 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 MARC2Q969Z3 335 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 TAF9BQ9HBM6 251 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms