RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 ZNF383Q8NA42 475 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 OR1K1Q8NGR3 316 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 CLDND2Q8NHS1 167 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 CPT1CQ8TCG5 803 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 SAP25Q8TEE9 199 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 MALSU1Q96EH3 234 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 TMEM56Q96MV1 263 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 SSX3Q99909 188 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 TCEAL7Q9BRU2 100 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 PRRG4Q9BZD6 226 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 PCED1AQ9H1Q7 454 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 ZNF552Q9H707 407 aaPredicted RBP7.47□□□□□ -1.21
TRIM6-203ENST00000380107 ZNF665Q9H7R5 613 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 Q9N2K0 584 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 TMEM56-RWDD3S4R434 201 aa7.47□□□□□ -1.21
TRIM6-203ENST00000380107 LOC102723996A0A087X1L8 192 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 ZNF732B4DXR9 585 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 K7ESF4 209 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 HMGB3O15347 200 aaKnown RBP7.46□□□□□ -1.21
TRIM6-203ENST00000380107 HSPA12AO43301 675 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 PSG2P11465 335 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 HOXA5P20719 270 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 CXCL12P48061 93 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 Q0VFX4 171 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 ZNF295-AS1Q8N0V1 137 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 INTS12Q96CB8 462 aaKnown RBP7.46□□□□□ -1.21
TRIM6-203ENST00000380107 PFDN5Q99471 154 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 SH2D2AQ9NP31 389 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 KIAA1456Q9P272 454 aa7.46□□□□□ -1.21
TRIM6-203ENST00000380107 MRPS17Q9Y2R5 130 aaKnown RBP7.46□□□□□ -1.21
TRIM6-203ENST00000380107 DCHS1Q96JQ0 3298 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 P04436 131 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 CELA3AP09093 270 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 METTL15P1P0C7V9 234 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 MMP9P14780 707 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 ZNF16P17020 682 aaPredicted RBP7.46□□□□□ -1.22
TRIM6-203ENST00000380107 GDF1P27539 372 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 MLF1P58340 268 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 ID3Q02535 119 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 CLEC12BQ2HXU8 276 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 SPINK14Q6IE38 97 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 ZNF880Q6PDB4 577 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 SPEM1Q8N4L4 309 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 ZNF610Q8N9Z0 462 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 KDF1Q8NAX2 398 aaPredicted RBP7.46□□□□□ -1.22
TRIM6-203ENST00000380107 RNASE11Q8TAA1 199 aaKnown RBP7.46□□□□□ -1.22
TRIM6-203ENST00000380107 SLC25A31Q9H0C2 315 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 OR1A1Q9P1Q5 309 aa7.46□□□□□ -1.22
TRIM6-203ENST00000380107 LRRC3CA6NJW4 275 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 MMP7P09237 267 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 VDAC1P21796 283 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 CDX1P47902 265 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 RPS16P62249 146 aaKnown RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 ARF1P84077 181 aaKnown RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 ARL16Q0P5N6 197 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 LYSMD4Q5XG99 296 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 BEND4Q6ZU67 534 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 WDR5BQ86VZ2 330 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 TDHQ8IZJ6 230 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 GPR146Q96CH1 333 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 TVP23CQ96ET8 276 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 FAM86C1Q9NVL1 165 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 IL36GQ9NZH8 169 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 ERRFI1Q9UJM3 462 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 COLQQ9Y215 455 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 RNF115Q9Y4L5 304 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 C9J4A7 227 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 SLC34A2O95436 690 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 CNOT4O95628 575 aaKnown RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 NAPSAO96009 420 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 S100A2P29034 98 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 ELLP55199 621 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 HOXA4Q00056 320 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 KRTAP27-1Q3LI81 207 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 SPATA46Q5T0L3 261 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 UNQ6494/PRO21346Q6UXR6 183 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 OR2V1Q8NHB1 315 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 ABHD5Q8WTS1 349 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 FRZBQ92765 325 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 ATP5SQ99766 215 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 SPIN2AQ99865 258 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 SPIN2BQ9BPZ2 258 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 SF3B5Q9BWJ5 86 aaKnown RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 HES7Q9BYE0 225 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 UBE2ZQ9H832 354 aaPredicted RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 PRDM6Q9NQX0 595 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 GAR1Q9NY12 217 aaKnown RBP7.45□□□□□ -1.22
TRIM6-203ENST00000380107 PPP1R3CQ9UQK1 317 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 LAMA5O15230 3695 aa7.45□□□□□ -1.22
TRIM6-203ENST00000380107 SVILO95425 2214 aa7.44□□□□□ -1.22
TRIM6-203ENST00000380107 TMEM265A0A087WTH1 108 aa7.44□□□□□ -1.22
TRIM6-203ENST00000380107 A0A1B0GW64 132 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms