RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 URGCP-MRPS24S4R325 110 aa13.28□□□□□ -0.28
BRF1-203ENST00000379937 SONP18583 2426 aaKnown RBP13.27□□□□□ -0.28
BRF1-203ENST00000379937 A0A0G2JRQ6 117 aa13.27□□□□□ -0.28
BRF1-203ENST00000379937 C3orf85A0A1B0GTC6 90 aa13.27□□□□□ -0.28
BRF1-203ENST00000379937 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.28
BRF1-203ENST00000379937 APELAP0DMC3 54 aa13.27□□□□□ -0.28
BRF1-203ENST00000379937 FGF8P55075 233 aaPredicted RBP13.27□□□□□ -0.28
BRF1-203ENST00000379937 TGFBR3Q03167 851 aa13.27□□□□□ -0.28
BRF1-203ENST00000379937 MRPS24Q96EL2 167 aaKnown RBP13.27□□□□□ -0.28
BRF1-203ENST00000379937 PIK3IP1Q96FE7 263 aa13.27□□□□□ -0.28
BRF1-203ENST00000379937 TRAV24A0A0B4J272 114 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 SNRNP70P08621 437 aaKnown RBP13.27□□□□□ -0.29
BRF1-203ENST00000379937 ZNF133P52736 654 aaPredicted RBP13.27□□□□□ -0.29
BRF1-203ENST00000379937 DPPA2Q7Z7J5 298 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 MDS2Q8NDY4 140 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 DNTTIP1Q9H147 329 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 TLNRD1Q9H1K6 362 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 SLC2A8Q9NY64 477 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 ZNF391Q9UJN7 358 aa13.27□□□□□ -0.29
BRF1-203ENST00000379937 A0A0D9SG52 128 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 LOC105371267A0A1B0GV96 52 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 OR5H1A6NKK0 313 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 HMSDA8MTL9 139 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 PAX6P26367 422 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 IL2RGP31785 369 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 H3F3CQ6NXT2 135 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 OR6K3Q8NGY3 331 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 SNIP1Q8TAD8 396 aaKnown RBP13.26□□□□□ -0.29
BRF1-203ENST00000379937 PRRX2Q99811 253 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 C1QTNF5Q9BXJ0 243 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 ST8SIA5O15466 376 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 RPS2P15880 293 aaKnown RBP13.26□□□□□ -0.29
BRF1-203ENST00000379937 CBX5P45973 191 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 CAMLGP49069 296 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 UCP2P55851 309 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 TAS2R31P59538 309 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 CEACAM21Q3KPI0 293 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 VAX1Q5SQQ9 334 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 PTX4Q96A99 478 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 USB1Q9BQ65 265 aaKnown RBP13.26□□□□□ -0.29
BRF1-203ENST00000379937 SAV1Q9H4B6 383 aaPredicted RBP13.26□□□□□ -0.29
BRF1-203ENST00000379937 ATP6V1G2-DDX39BF2Z307 99 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 CECR9P0C854 216 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 ALDH3B1P43353 468 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 GNG3P63215 75 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 DBX2Q6ZNG2 339 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 FAM214BQ7L5A3 538 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 LDLRAD3Q86YD5 345 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 BVESQ8NE79 360 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
BRF1-203ENST00000379937 PNLIPRP3Q17RR3 467 aa13.25□□□□□ -0.29
BRF1-203ENST00000379937 REG4Q9BYZ8 158 aa13.25□□□□□ -0.29
BRF1-203ENST00000379937 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
BRF1-203ENST00000379937 CHST1O43916 411 aa13.25□□□□□ -0.29
BRF1-203ENST00000379937 GCH1P30793 250 aa13.25□□□□□ -0.29
BRF1-203ENST00000379937 WFDC1Q9HC57 220 aa13.25□□□□□ -0.29
BRF1-203ENST00000379937 USP9XQ93008 2570 aaPredicted RBP13.25□□□□□ -0.29
BRF1-203ENST00000379937 C9JQL5 133 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 MPPED1O15442 326 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 SCGNO76038 276 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 KIR2DL2P43627 348 aaPredicted RBP13.24□□□□□ -0.29
BRF1-203ENST00000379937 GNG10P50151 68 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 DAZAP2Q15038 168 aaPredicted RBP13.24□□□□□ -0.29
BRF1-203ENST00000379937 OR8B8Q15620 311 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 RIPPLY2Q5TAB7 128 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 SCGB3A2Q96PL1 93 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 RASL12Q9NYN1 266 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 PUS1Q9Y606 427 aaKnown RBP eCLIP13.24□□□□□ -0.29
BRF1-203ENST00000379937 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
BRF1-203ENST00000379937 MFSD2BA6NFX1 497 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 TPPPO94811 219 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 ATG12O94817 140 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 HKR1P10072 659 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 OR2F1Q13607 317 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 OR5C1Q8NGR4 320 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 SDSLQ96GA7 329 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 RAMP3O60896 148 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 CTSSP25774 331 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 CFPP27918 469 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 G6PCP35575 357 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 NKX2-1P43699 371 aaPredicted RBP13.24□□□□□ -0.29
BRF1-203ENST00000379937 MIDNQ504T8 468 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 BCL2L2Q92843 193 aaPredicted RBP13.24□□□□□ -0.29
BRF1-203ENST00000379937 S100PBPQ96BU1 408 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 CNTNAP3BQ96NU0 1288 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 CNTNAP3Q9BZ76 1288 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 PSG11Q9UQ72 335 aa13.24□□□□□ -0.29
BRF1-203ENST00000379937 COL5A1P20908 1838 aaPredicted RBP13.23□□□□□ -0.29
BRF1-203ENST00000379937 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
BRF1-203ENST00000379937 ARR3P36575 388 aa13.23□□□□□ -0.29
BRF1-203ENST00000379937 RPL35P42766 123 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms