RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TLE4Q04727 773 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 GUK1Q16774 197 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 SSX7Q7RTT5 188 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 PIP4P1Q86T03 277 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 PP6455Q8WZ26 134 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 PRRT1Q99946 306 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 MAP1AP78559 2803 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-201ENST00000379433 IGKV1-12A0A0C4DH73 117 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 F5H5P2 479 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 IGKV1D-12P01611 117 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 HOXB5P09067 269 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 APLNRP35414 380 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 PKIAP61925 76 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 MDP1Q86V88 176 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 TMEM229BQ8NBD8 167 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 FAM222BQ8WU58 562 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 M0R233 179 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 CD200P41217 278 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 RPS27AP62979 156 aaKnown RBP9.29□□□□□ -0.92
NEDD9-201ENST00000379433 FOXF2Q12947 444 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 SP6Q3SY56 376 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 ZFP62Q8NB50 900 aaPredicted RBP9.29□□□□□ -0.92
NEDD9-201ENST00000379433 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 RDH5Q92781 318 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 SPSB4Q96A44 273 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 WDYHV1Q96HA8 205 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 IP6K3Q96PC2 410 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 PECRQ9BY49 303 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF732B4DXR9 585 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 PRAF2O60831 178 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 IFNA7P01567 189 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 UBE2NP61088 152 aaKnown RBP9.29□□□□□ -0.92
NEDD9-201ENST00000379433 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
NEDD9-201ENST00000379433 TMPRSS5Q9H3S3 457 aa9.29□□□□□ -0.92
NEDD9-201ENST00000379433 MPTX1A8MV57 137 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 DNPH1O43598 174 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 MMP7P09237 267 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 NFYAP23511 347 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 OTX1P32242 354 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 AKR1C3P42330 323 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 MALLQ13021 153 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 PRDX4Q13162 271 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 PHLDA2Q53GA4 152 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 SLC36A1Q7Z2H8 476 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 RPRMLQ8N4K4 120 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 COQ8AQ8NI60 647 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 SCARB1Q8WTV0 552 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 WFIKKN1Q96NZ8 548 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 HIST1H2AAQ96QV6 131 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 SULT4A1Q9BR01 284 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 PIPOXQ9P0Z9 390 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 C14orf166Q9Y224 244 aaKnown RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 CDRT15L2A8MXV6 281 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 IL18BPO95998 194 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 CHRM2P08172 466 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 AGTR1P30556 359 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 S100A11P31949 105 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 CDPF1Q6NVV7 123 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 TEX261Q6UWH6 196 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 EIF4E3Q8N5X7 224 aaKnown RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 OR10AD1Q8NGE0 317 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 AK3Q9UIJ7 227 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 U3KQ87 197 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 V9GYS6 101 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 K7EQM0 130 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 SIVA1O15304 175 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 TFF1P04155 84 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 GRPP07492 148 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 BCL3P20749 454 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 FABP6P51161 128 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 ATP1B3P54709 279 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 RAB31Q13636 194 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 CLLU1Q5K131 121 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 COLCA1Q6ZS62 124 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-201ENST00000379433 FN3KRPQ9HA64 309 aa9.28□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF816-ZNF321PA0A0X1KG74 233 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 EREGO14944 169 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 SYNGR1O43759 233 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 MPC2O95563 127 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 PPBPP02775 128 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 TNFRSF1AP19438 455 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 CXCL2P19875 107 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 CCL1P22362 96 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 SEC61A1P61619 476 aaKnown RBP9.27□□□□□ -0.93
NEDD9-201ENST00000379433 TMEM177Q53S58 311 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF529Q6P280 563 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 SLC30A7Q8NEW0 376 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 LRRC46Q96FV0 321 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 OR2J1Q9GZK6 312 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 MS4A5Q9H3V2 200 aa9.27□□□□□ -0.93
NEDD9-201ENST00000379433 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms