RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 M0QZ24 198 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 DVL1O14640 695 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 TNFRSF13BO14836 293 aaPredicted RBP11.29□□□□□ -0.6
PRPF18-202ENST00000378572 NXPH2O95156 264 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 GABRR1P24046 479 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 CHATP28329 748 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 PRSS3P35030 304 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 IFITM3Q01628 133 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 ZNF146Q15072 292 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 TRIQKQ629K1 86 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 OR8H2Q8N162 312 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 GPX8Q8TED1 209 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 THAP7Q9BT49 309 aaPredicted RBP11.29□□□□□ -0.6
PRPF18-202ENST00000378572 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 ABCB10Q9NRK6 738 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 RCC2Q9P258 522 aaKnown RBP11.29□□□□□ -0.6
PRPF18-202ENST00000378572 RBMX2Q9Y388 322 aaKnown RBP11.29□□□□□ -0.6
PRPF18-202ENST00000378572 POMT1Q9Y6A1 747 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 TRRAPQ9Y4A5 3859 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 A0A0U1RQK1 487 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 PDCD6O75340 191 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 LHBP01229 141 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 IGHV4-59P01825 116 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 GLAP06280 429 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 GLRA1P23415 457 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 DGCR2P98153 550 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 SCN1BQ07699 218 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 MICBQ29980 383 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 SMIM21Q3B7S5 101 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 ACP7Q6ZNF0 438 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 LYSMD2Q8IV50 215 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 GCSAMQ8N6F7 178 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 FCAMRQ8WWV6 532 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 ARHGAP5-AS1Q96IT6 56 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 NEDD4LQ96PU5 975 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 PECRQ9BY49 303 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 DNAJB11Q9UBS4 358 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 KCNK7Q9Y2U2 307 aa11.29□□□□□ -0.6
PRPF18-202ENST00000378572 TMEM235A6NFC5 223 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 GPR137BO60478 399 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 OR7C1O76099 320 aaPredicted RBP11.28□□□□□ -0.6
PRPF18-202ENST00000378572 NDUFA7O95182 113 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 ECDO95905 644 aaPredicted RBP11.28□□□□□ -0.6
PRPF18-202ENST00000378572 LPLP06858 475 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 MMP9P14780 707 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 GNB3P16520 340 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 FUT3P21217 361 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 IKZF1Q13422 519 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 VMO1Q7Z5L0 202 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 SEH1LQ96EE3 360 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 CCL13Q99616 98 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 PLEKHJ1Q9NW61 149 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 MTFP1Q9UDX5 166 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
PRPF18-202ENST00000378572 A0A1W2PQ09 198 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 TIMM23O14925 209 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 PTHLHP12272 177 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 RELBQ01201 579 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 SLC36A1Q7Z2H8 476 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 BATF2Q8N1L9 274 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 FAM216BQ8N7L0 139 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.61
PRPF18-202ENST00000378572 DYRK2Q92630 601 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 IL36RNQ9UBH0 155 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 GLS2Q9UI32 602 aa11.27□□□□□ -0.61
PRPF18-202ENST00000378572 ZNF107Q9UII5 783 aaPredicted RBP11.27□□□□□ -0.61
PRPF18-202ENST00000378572 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.61
PRPF18-202ENST00000378572 A0A1B0GW55 424 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 A0A1W2PRD5 423 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 A0A1W2PRF3 423 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 A0A1W2PRM7 423 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 MEIOCA2RUB1 952 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 NKX6-3A6NJ46 265 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.26□□□□□ -0.61
PRPF18-202ENST00000378572 NDUFB3O43676 98 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 RBBP9O75884 186 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 CD3GP09693 182 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L2P0CJ85 424 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L3P0CJ86 424 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L4P0CJ87 422 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L5P0CJ88 424 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L6P0CJ89 424 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L7P0CJ90 424 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DEFA1P59665 94 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DEFA3P59666 94 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 GNG2P59768 71 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 ACTBP60709 375 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
PRPF18-202ENST00000378572 Q6P435 159 aa11.26□□□□□ -0.61
PRPF18-202ENST00000378572 DUX4L9Q6RFH8 374 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms