RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 OR2V1Q8NHB1 315 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 ZNF764Q96H86 408 aaPredicted RBP7.75□□□□□ -1.17
LIG3-202ENST00000378526 SIGLEC11Q96RL6 698 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 DUSP23Q9BVJ7 150 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 NKX2-8O15522 239 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 LPAR6P43657 344 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 PRDX1Q06830 199 aaKnown RBP7.75□□□□□ -1.17
LIG3-202ENST00000378526 OR4D9Q8NGE8 314 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 OR52E1Q8NGJ3 308 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 SFXN1Q9H9B4 322 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 TMEM30AQ9NV96 361 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 SPATA31D1Q6ZQQ2 1576 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 M0R082 166 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 UBE2CO00762 179 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 ID1P41134 155 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 EWSR1Q01844 656 aaKnown RBP eCLIP7.75□□□□□ -1.17
LIG3-202ENST00000378526 TPTE2P1Q5T6R2 138 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 TRAV38-1A0A0B4J264 116 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 GGTLC3B5MD39 225 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 FREM3P0C091 2139 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 DLK2Q6UY11 383 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 SLC25A26Q70HW3 274 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 PDCD11Q14690 1871 aaKnown RBP7.75□□□□□ -1.17
LIG3-202ENST00000378526 KLKB1P03952 638 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 RRADP55042 308 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 VGLL4Q14135 290 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 LRRC75BQ2VPJ9 315 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 SFTPA2Q8IWL1 248 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 SFTPA1Q8IWL2 248 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 ST8SIA1Q92185 356 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 KLF12Q9Y4X4 402 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 TRAV5A0A0B4J249 113 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 OR4A8P0C604 315 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 PVRP15151 417 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
LIG3-202ENST00000378526 CEACAM3P40198 252 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 MPLP40238 635 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 HBBP68871 147 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 PRNTQ86SH4 94 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 ATOH7Q8N100 152 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 BHLHE23Q8NDY6 225 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 SLC25A1P53007 311 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 C2orf83Q53S99 150 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 KIR3DL3Q8N743 410 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 ZBTB34Q8NCN2 500 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 ARHGAP5-AS1Q96IT6 56 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 TUBA4BQ9H853 241 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 MYOZ1Q9NP98 299 aaPredicted RBP7.75□□□□□ -1.17
LIG3-202ENST00000378526 DIP2AQ14689 1571 aa7.75□□□□□ -1.17
LIG3-202ENST00000378526 TRBV7-9A0A0J9YWB2 115 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 MRGPREQ86SM8 312 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 PEAK1Q9H792 1746 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 HOXA5P20719 270 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 HIST1H2BAQ96A08 127 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 ZNF707Q96C28 371 aaPredicted RBP7.74□□□□□ -1.17
LIG3-202ENST00000378526 ABHD1Q96SE0 405 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 PRDM13Q9H4Q3 707 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 LRRK1Q38SD2 2015 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 A0A1W2PP55 124 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 TCRBV5S2A0A599 114 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 C5orf49A4QMS7 147 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 CDC14BO60729 498 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 FGF5P12034 268 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 IFITM1P13164 125 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 VEGFAP15692 232 aaPredicted RBP7.74□□□□□ -1.17
LIG3-202ENST00000378526 LGALS7P47929 136 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 LY6G5CQ5SRR4 150 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 MAVSQ7Z434 540 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 FGF13Q92913 245 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 C10orf35Q96D05 121 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 PAXXQ9BUH6 204 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 TRAV30A0A087WSZ9 112 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 A0A1W2PQU0 124 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 C19orf24Q9BVV8 132 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 INSL5Q9Y5Q6 135 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 UBR1Q8IWV7 1749 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 CD300CQ08708 224 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 HSD52Q0P140 79 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 CST6Q15828 149 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 CEACAM16Q2WEN9 425 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 SLC48A1Q6P1K1 146 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 C10orf111Q8N326 155 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 TMEM186Q96B77 213 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 IGSF21Q96ID5 467 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 PHLDA3Q9Y5J5 127 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 ODAMA1E959 279 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 PPIAL4DF5H284 164 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 VAX1Q5SQQ9 334 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 OTPQ5XKR4 325 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 RGS7BPQ6MZT1 257 aaPredicted RBP7.74□□□□□ -1.17
LIG3-202ENST00000378526 ZNF788Q6ZQV5 615 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 OR6X1Q8NH79 312 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 PRNDQ9UKY0 176 aa7.74□□□□□ -1.17
LIG3-202ENST00000378526 F12P00748 615 aaPredicted RBP7.73□□□□□ -1.17
LIG3-202ENST00000378526 NPWQ8N729 165 aa7.73□□□□□ -1.17
LIG3-202ENST00000378526 DLX4Q92988 240 aaPredicted RBP7.73□□□□□ -1.17
LIG3-202ENST00000378526 TSACCQ96A04 125 aaPredicted RBP7.73□□□□□ -1.17
LIG3-202ENST00000378526 WSB2Q9NYS7 404 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms