RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 KIAA2026Q5HYC2 2103 aa10.8□□□□□ -0.68
CKAP2-202ENST00000378034 A0A087X0M5 115 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 A0A1B0GX30 115 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 CD34P28906 385 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 SERPINB10P48595 397 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 VBP1P61758 197 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 NCS1P62166 190 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 KRTAP21-3Q3LHN1 58 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 TMEM30BQ3MIR4 351 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 PRAMEF5Q5TYX0 476 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 SIGLECL1Q8N7X8 197 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 OR10R2Q8NGX6 335 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 CCDC107Q8WV48 283 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 DYRK2Q92630 601 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 SLC25A46Q96AG3 418 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 RAB3CQ96E17 227 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 BCL7BQ9BQE9 202 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 CLEC7AQ9BXN2 247 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 MBNL3Q9NUK0 354 aaKnown RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 IDI2-AS1Q9NZ38 188 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 FAM96BQ9Y3D0 163 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 ODF3BA8MYP8 253 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 MMP23AO75900 390 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 SNRPBP14678 240 aaKnown RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 COX7A1P24310 79 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 SAA4P35542 130 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 LGALS4P56470 323 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 PRB3Q04118 309 aaPredicted RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 DEFB112Q30KQ8 113 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 ZNF626Q68DY1 528 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 OR52M1Q8NGK5 317 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 OR4K15Q8NH41 348 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 MRPL30Q8TCC3 161 aaKnown RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 LGALS14Q8TCE9 139 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 ARHGAP5-AS1Q96IT6 56 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 KIRREL1Q96J84 757 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 PECRQ9BY49 303 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 ZMAT3Q9HA38 289 aaKnown RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 KCNIP1Q9NZI2 227 aa10.79□□□□□ -0.68
CKAP2-202ENST00000378034 TBL2Q9Y4P3 447 aaKnown RBP10.79□□□□□ -0.68
CKAP2-202ENST00000378034 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 A0A0U1RQK1 487 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 MEIOCA2RUB1 952 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 C15orf65H3BRN8 121 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 RAB27BO00194 218 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 NAPSAO96009 420 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 FBP1P09467 338 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 MOB1BQ7L9L4 216 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 ABHD12Q8N2K0 398 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 ARL11Q969Q4 196 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 NAA50Q9GZZ1 169 aaKnown RBP10.78□□□□□ -0.68
CKAP2-202ENST00000378034 MGAT4AQ9UM21 535 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 SPATA2Q9UM82 520 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 JMJD1CQ15652 2540 aa10.78□□□□□ -0.68
CKAP2-202ENST00000378034 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 A0A1W2PRD5 423 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 A0A1W2PRF3 423 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 A0A1W2PRM7 423 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 SPINT2O43291 252 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 PAHP00439 452 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 ARG1P05089 322 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 OMGP23515 440 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 SSTR5P35346 364 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 TMBIM6P55061 237 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 DYNC1I2Q13409 638 aaKnown RBP10.77□□□□□ -0.68
CKAP2-202ENST00000378034 PLAC9Q5JTB6 97 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 Q6YL49 198 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 LDLRAD3Q86YD5 345 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 ZNF596Q8TC21 504 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 RAB2BQ8WUD1 216 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 ZFAND2BQ8WV99 257 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 RHBDL2Q9NX52 303 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 AK3Q9UIJ7 227 aa10.77□□□□□ -0.68
CKAP2-202ENST00000378034 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.68
CKAP2-202ENST00000378034 A0A0A6YYH2 397 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 A6NJ64 397 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 SERPINE3A8MV23 424 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 C12orf77C9JDV5 145 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 CLDN34H7C241 214 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 F2RL2O00254 374 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 HIST1H1DP16402 221 aaKnown RBP10.77□□□□□ -0.69
CKAP2-202ENST00000378034 GDNFP39905 211 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 PRRX1P54821 245 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 BAMBIQ13145 260 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 MOGAT2Q3SYC2 334 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 Q3ZCU0 254 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 MINOS1Q5TGZ0 78 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 ZNF880Q6PDB4 577 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 CLVS1Q8IUQ0 354 aaPredicted RBP10.77□□□□□ -0.69
CKAP2-202ENST00000378034 TMEM86BQ8N661 226 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 BEND2Q8NDZ0 799 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 RFESDQ8TAC1 157 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 CREB3L1Q96BA8 519 aa10.77□□□□□ -0.69
CKAP2-202ENST00000378034 CHMP1AQ9HD42 196 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms