RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 NXF2Q9GZY0 626 aaKnown RBP17.08■□□□□ 0.32
PCDH8-202ENST00000377942 ZMIZ1Q9ULJ6 1067 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 NDUFA2O43678 99 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 LGALS7P47929 136 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 CCL8P80075 99 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 COL10A1Q03692 680 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 FDX2Q6P4F2 183 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 ALX4Q9H161 411 aaPredicted RBP17.08■□□□□ 0.32
PCDH8-202ENST00000377942 LRRC3CA6NJW4 275 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 POLR2GP62487 172 aaKnown RBP eCLIP17.08■□□□□ 0.32
PCDH8-202ENST00000377942 AESQ08117 197 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 TMEM54Q969K7 222 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 SH2D2AQ9NP31 389 aa17.08■□□□□ 0.32
PCDH8-202ENST00000377942 FOXD3Q9UJU5 478 aaPredicted RBP17.08■□□□□ 0.32
PCDH8-202ENST00000377942 CTRB1P17538 263 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 ASCL1P50553 236 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 EGR4Q05215 589 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 CTRB2Q6GPI1 263 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 CD200R1LQ6Q8B3 271 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 RASL11BQ9BPW5 248 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 ZNF703Q9H7S9 590 aaPredicted RBP17.07■□□□□ 0.32
PCDH8-202ENST00000377942 FBXL17Q9UF56 701 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 ABCA7Q8IZY2 2146 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 SCGB1D1O95968 90 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 PRF1P14222 555 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 KIAA0141Q14154 515 aaPredicted RBP17.07■□□□□ 0.32
PCDH8-202ENST00000377942 OR52L2PQ8NGH6 319 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 OR2V2Q96R30 315 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 SEZ6L2Q6UXD5 910 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 PGLYRP3Q96LB9 341 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 CABLES2Q9BTV7 478 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
PCDH8-202ENST00000377942 TRBV5-7A0A0A0MS05 114 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 NDUFA6P56556 154 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 PHYHD1Q5SRE7 291 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 MS4A3Q96HJ5 214 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 FAM206AQ9NX38 181 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 KCNMB2Q9Y691 235 aa17.07■□□□□ 0.32
PCDH8-202ENST00000377942 A0A1B0GU03 582 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 GOSR1O95249 250 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 GUK1Q16774 197 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 VAX1Q5SQQ9 334 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 GCSAMQ8N6F7 178 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 ZNF596Q8TC21 504 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 IGHV3OR15-7A0A075B7D8 119 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 ID4P47928 161 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 ERVFRD-1P60508 538 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 LINC01590Q5TEZ4 76 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 FNDC7Q5VTL7 733 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 SAXO1Q8IYX7 474 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 DTD1Q8TEA8 209 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 ELOVL5Q9NYP7 299 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 MAP1LC3B2A6NCE7 125 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 PLA2G10O15496 165 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 SYNGR1O43759 233 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 FCGR3AP08637 254 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 MIDNQ504T8 468 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 FAM122AQ96E09 287 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 MAP1LC3BQ9GZQ8 125 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 AICDAQ9GZX7 198 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 MMP26Q9NRE1 261 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 CISD1Q9NZ45 108 aaKnown RBP17.06■□□□□ 0.32
PCDH8-202ENST00000377942 RNASEK-C17orf49H0YIS7 233 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 MBPP02686 304 aaPredicted RBP17.06■□□□□ 0.32
PCDH8-202ENST00000377942 COX6B1P14854 86 aa17.06■□□□□ 0.32
PCDH8-202ENST00000377942 SBF1O95248 1867 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 ADRA2AP08913 450 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 TMEM65Q6PI78 240 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 ZNF426Q9BUY5 554 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 A0A1W2PRD5 423 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 A0A1W2PRF3 423 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 A0A1W2PRM7 423 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 ZNF79Q15937 498 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 RSPO4Q2I0M5 234 aaPredicted RBP17.05■□□□□ 0.32
PCDH8-202ENST00000377942 SNX22Q96L94 193 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 MRPS18CQ9Y3D5 142 aaKnown RBP17.05■□□□□ 0.32
PCDH8-202ENST00000377942 CDC34P49427 236 aaPredicted RBP17.05■□□□□ 0.32
PCDH8-202ENST00000377942 TMEM33P57088 247 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 BCL2L2Q92843 193 aaPredicted RBP17.05■□□□□ 0.32
PCDH8-202ENST00000377942 HARBI1Q96MB7 349 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 LPAR5Q9H1C0 372 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 PPP1R3EQ9H7J1 279 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 LOC102723996A0A087X1L8 192 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 TGFBR3LH3BV60 316 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 OR5I1Q13606 314 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 CLEC2AQ6UVW9 174 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 Q6ZT83 130 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 ITLN1Q8WWA0 313 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 ZNF488Q96MN9 340 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 RNF115Q9Y4L5 304 aa17.05■□□□□ 0.32
PCDH8-202ENST00000377942 SPTBP11277 2137 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 DAOP14920 347 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 FAM3AP98173 230 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 ZCCHC14Q8WYQ9 949 aaKnown RBP17.04■□□□□ 0.32
PCDH8-202ENST00000377942 WNT5BQ9H1J7 359 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 KLF4O43474 513 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 UNQ9370/PRO34162Q6UXP9 181 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 TCTEX1D1Q8N7M0 179 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 CTDSP1Q9GZU7 261 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms