RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 HSPB9Q9BQS6 159 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 TMEM189A5PLL7 270 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 GFYI3L273 518 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 TM4SF20Q53R12 229 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 MEIG1Q5JSS6 88 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 SLC25A17O43808 307 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 CYB5R3P00387 301 aaPredicted RBP10.31□□□□□ -0.76
VPS13A-205ENST00000376636 TCF24Q7RTU0 167 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 METTL26Q96S19 204 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 WNT5BQ9H1J7 359 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 MMP17Q9ULZ9 603 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 SPTA1P02549 2419 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 TRBV9A0A0B4J1U6 114 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 RPS20P60866 119 aaKnown RBP10.31□□□□□ -0.76
VPS13A-205ENST00000376636 TMEM174Q8WUU8 243 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 GPR27Q9NS67 375 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 MTCH2Q9Y6C9 303 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 A0A1B0GV90 55 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 CTDSPLO15194 276 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ZBTB34Q8NCN2 500 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ZCCHC14Q8WYQ9 949 aaKnown RBP10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ITGB4P16144 1822 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 SERF2P84101 59 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 TBC1D29Q9UFV1 150 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 RIMKLAQ8IXN7 391 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ETFBKMTQ8IXQ9 262 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 THAP10Q9P2Z0 257 aaPredicted RBP10.3□□□□□ -0.76
VPS13A-205ENST00000376636 LINC01553A4QN01 128 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 FCGR3AP08637 254 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF137PP52743 207 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 TMEM211Q6ICI0 200 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 HCFC2Q9Y5Z7 792 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 A0A1W2PS18 150 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 AMY1AP04745 511 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 MOGAT3Q86VF5 341 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ASB5Q8WWX0 329 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 C2orf88Q9BSF0 95 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 TCRBV5S2A0A599 114 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 CXorf65A6NEN9 183 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 F11P03951 625 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 COX7A1P24310 79 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 PRDX2P32119 198 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 IBA57Q5T440 356 aaKnown RBP10.3□□□□□ -0.76
VPS13A-205ENST00000376636 SEZ6L2Q6UXD5 910 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 SLC25A40Q8TBP6 338 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 MRGPRDQ8TDS7 321 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 IGHV4-34P06331 123 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 CDKN2AP42771 156 aaKnown RBP10.3□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF83P51522 516 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 MRGPRX3Q96LB0 322 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 TSPAN32Q96QS1 320 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 MPC1Q9Y5U8 109 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 TRGV5A0A0B4J1U4 118 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 UPK1AO00322 258 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 MMP9P14780 707 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 OPN4Q9UHM6 478 aa10.3□□□□□ -0.76
VPS13A-205ENST00000376636 MED19A0JLT2 244 aaPredicted RBP10.29□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF98A6NK75 572 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 J3KRW8 73 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 ZFPL1O95159 310 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 BCL2P10415 239 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 FAM209BQ5JX69 171 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 LDLRAD3Q86YD5 345 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 OR10AC1Q8NH08 325 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 C4orf45Q96LM5 186 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 PDLIM7Q9NR12 457 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 LOXL2Q9Y4K0 774 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 POLR2GP62487 172 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS13A-205ENST00000376636 OLIG3Q7RTU3 272 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 PLPPR2Q96GM1 343 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 NEUROG1Q92886 237 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 ALG14Q96F25 216 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 ANKRD20A5PA0PJZ0 165 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 CDS2O95674 445 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 RECKO95980 971 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 CHST1O43916 411 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 LRRC29Q8WV35 223 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 TMEM101Q96IK0 257 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 HARBI1Q96MB7 349 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 SLC25A37Q9NYZ2 338 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 A0A0B4J293 547 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 FAM157AC9JC47 383 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 CRYBB2P43320 205 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 DEFB109BQ30KR1 87 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 CLN8Q9UBY8 286 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 TRAV8-7A0A075B6U6 113 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 RELQ04864 619 aaPredicted RBP10.29□□□□□ -0.76
VPS13A-205ENST00000376636 FMODQ06828 376 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF385CQ66K41 422 aaPredicted RBP10.29□□□□□ -0.76
VPS13A-205ENST00000376636 MRGPRX1Q96LB2 322 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 P2RX4Q99571 388 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 IGLV3-10A0A075B6K4 115 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 WDR38Q5JTN6 314 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 OR4A5Q8NH83 315 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 DDA1Q9BW61 102 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms