RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 LFNGQ8NES3 379 aa10.6□□□□□ -0.71
TNFSF13B-201ENST00000375887 PFDN5Q99471 154 aa10.6□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM86C1Q9NVL1 165 aa10.6□□□□□ -0.71
TNFSF13B-201ENST00000375887 CLEC18AA5D8T8 446 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 H0YL77 283 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 CLN5O75503 358 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 VDAC1P21796 283 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 CEACAM21Q3KPI0 293 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 OR2B11Q5JQS5 317 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 CLEC18CQ8NCF0 446 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 NEK7Q8TDX7 302 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 CALHM2Q9HA72 323 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 TNRC6BQ9UPQ9 1833 aaKnown RBP10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 ESPL1Q14674 2120 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 NCOR1O75376 2440 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A10PA6NDY2 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A18PA6NE21 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A16PA6NEW6 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A20PA6NIJ5 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 ARGFXA6NJG6 315 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A8PA6NJQ4 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A7PA6NKC0 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A22PA8MWA6 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A12PA8MX19 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A5PA8MXJ8 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A23PA8MXZ1 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 H3BP45 60 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 H3BQ15 152 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 OR2C1O95371 312 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A15PP0C7V4 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A13PP0C7W8 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A14PP0C7W9 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FAM90A24PP0C7X0 464 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 VAMP2P63027 116 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 FIP1L1Q6UN15 594 aaKnown RBP10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 C17orf78Q8N4C9 275 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 IL22RA1Q8N6P7 574 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 MMP24Q9Y5R2 645 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 MED13Q9UHV7 2174 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 MED12LQ86YW9 2145 aa10.59□□□□□ -0.71
TNFSF13B-201ENST00000375887 KIAA2026Q5HYC2 2103 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 HS3ST1O14792 307 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 SLC34A2O95436 690 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 JMJD7P0C870 316 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 RAB2AP61019 212 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 ZXDAP98168 799 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 DEFA6Q01524 100 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 ZNF343Q6P1L6 599 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 Q6ZRM9 215 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 CT55Q8WUE5 264 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 RDH5Q92781 318 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 TMEM45BQ96B21 275 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 RAB39BQ96DA2 213 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 MUCL1Q96DR8 90 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 MALSU1Q96EH3 234 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 SPIN2AQ99865 258 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 SPIN2BQ9BPZ2 258 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 SLC25A31Q9H0C2 315 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 RD3LP0DJH9 198 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 LHX2P50458 406 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 ICAM4Q14773 271 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 SRSF7Q16629 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 NCMAPQ5T1S8 102 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 MRPL21Q7Z2W9 205 aaKnown RBP10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 ZDHHC23Q8IYP9 409 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 CYB561D1Q8N8Q1 229 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 MRPL30Q8TCC3 161 aaKnown RBP10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 LRFN1Q9P244 771 aa10.58□□□□□ -0.72
TNFSF13B-201ENST00000375887 TRAV24A0A0B4J272 114 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 FAM166BA8MTA8 275 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 KIAA1324LA8MWY0 1029 aaPredicted RBP10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 MAS1LP35410 378 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 HNF4GQ14541 408 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 C9orf152Q5JTZ5 239 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 PLA2G3Q9NZ20 509 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 TREM2Q9NZC2 230 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 MRPS18CQ9Y3D5 142 aaKnown RBP10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 CACNA1DQ01668 2161 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 TRAPPC2LH3BP13 241 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 HSPA12AO43301 675 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 PPIHO43447 177 aaKnown RBP10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 NEURL1O76050 574 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 SERPINA7P05543 415 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 TDGF1P13385 188 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 F2RP25116 425 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 CLDN18P56856 261 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 HOXA4Q00056 320 aaPredicted RBP10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 NRN1LQ496H8 165 aa10.57□□□□□ -0.72
TNFSF13B-201ENST00000375887 ZNF324BQ6AW86 544 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms