RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 H3BP45 60 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 M0QZ24 198 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 B4GALT1P15291 398 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 BADQ92934 168 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 ALG14Q96F25 216 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 SOD3P08294 240 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 HKR1P10072 659 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 AREGP15514 252 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 AGAP20933 346 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 PCP4P48539 62 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 TMEM50BP56557 158 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 CDX2Q99626 313 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-204ENST00000375290 SLC25A22Q9H936 323 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 ONECUT2O95948 504 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 NUDT8Q8WV74 236 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 IL36GQ9NZH8 169 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 PTPRFP10586 1907 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 MTCL1Q9Y4B5 1905 aaKnown RBP8.95□□□□□ -0.98
PTCH1-204ENST00000375290 OR2M5A3KFT3 312 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 FHITP49789 147 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 NRN1LQ496H8 165 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 R3HDM4Q96D70 268 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 AMY1AP04745 511 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 ASAH2BP0C7U1 165 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-204ENST00000375290 CEACAM16Q2WEN9 425 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF506Q5JVG8 444 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 TMEFF1Q8IYR6 380 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 C12orf76Q8N812 135 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-204ENST00000375290 A0A1B0GW64 132 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 RHBDL1O75783 438 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF385CQ66K41 422 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-204ENST00000375290 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 RNF122Q9H9V4 155 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 GPR27Q9NS67 375 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 PLXNB2O15031 1838 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 FAM27BQ5VT28 67 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 KBTBD11O94819 623 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 LINC01555Q8NAE3 123 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 TPSD1Q9BZJ3 242 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 SRSF10O75494 262 aaKnown RBP8.95□□□□□ -0.98
PTCH1-204ENST00000375290 C16orf82Q7Z2V1 217 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 OR4C3Q8NH37 302 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 PRRT4C9JH25 899 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 NRG2O14511 850 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF519Q8TB69 540 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 FBLN5Q9UBX5 448 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 DOCK5Q9H7D0 1870 aa8.95□□□□□ -0.98
PTCH1-204ENST00000375290 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 INSL4Q14641 139 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 MRPL54Q6P161 138 aaKnown RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 HLA-DRB1P01911 266 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 COL8A1P27658 744 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 SHISA6Q6ZSJ9 500 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 SPPL3Q8TCT6 385 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 HIST1H2BAQ96A08 127 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 GPR61Q9BZJ8 451 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 UBR3Q6ZT12 1888 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 BMPR1BO00238 502 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 OR5AS1Q8N127 324 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 H2BFSP57053 126 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF816Q0VGE8 651 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF260Q3ZCT1 412 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 CYP2G1PQ6ZSU1 146 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 VN1R17PQ8TDU5 208 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 SPATA45Q537H7 98 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 S100A4P26447 101 aaKnown RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 TCL1AP56279 114 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 SP6Q3SY56 376 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 DHRS13Q6UX07 377 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 NEUROG1Q92886 237 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 SPACA5Q96QH8 159 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 CXXC4Q9H2H0 198 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 VSIG10L2P0DP72 767 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 ADAT3Q96EY9 351 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 KNL1Q8NG31 2342 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 CKAP5Q14008 2032 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 EFSO43281 561 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 TTRP02766 147 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 RBM11P57052 281 aaKnown RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 EFNB1P98172 346 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 INSM1Q01101 510 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 RHBDD2Q6NTF9 364 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 VN1R4Q7Z5H5 301 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 GSN-AS1Q9NRJ2 163 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 TRAV8-7A0A075B6U6 113 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 IFNL4K9M1U5 179 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF547Q8IVP9 402 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 OR10AG1Q8NH19 301 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 MYOZ3Q8TDC0 251 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 QTRT1Q9BXR0 403 aaKnown RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 PARD6GQ9BYG4 376 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-204ENST00000375290 DUSP13Q9UII6 198 aa8.94□□□□□ -0.98
PTCH1-204ENST00000375290 ZFP36L2P47974 494 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms