RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 UBE2J1Q9Y385 318 aaPredicted RBP17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 RNF115Q9Y4L5 304 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 CEP290O15078 2479 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 NKX6-3A6NJ46 265 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 TRAPPC6AO75865 159 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 IFNA5P01569 189 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 CTSEP14091 401 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 AADACP22760 399 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 TMEM183BQ1AE95 376 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 OIT3Q8WWZ8 545 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 GPHA2Q96T91 129 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 TRAPPC1Q9Y5R8 145 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 LAMA1P25391 3075 aa17.74■□□□□ 0.43
TMEFF1-201ENST00000374879 TRBV11-1A0A0K0K1C0 115 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 TDGF1P13385 188 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 GABRG2P18507 467 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 PLA2G5P39877 138 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 ID3Q02535 119 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 DTX1Q86Y01 620 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 SELENOHQ8IZQ5 122 aaKnown RBP17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 LYZL4Q96KX0 146 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 MANBALQ9NQG1 85 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 FAHP16930 419 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 IL12BP29460 328 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 CDKN1AP38936 164 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 RPL15P61313 204 aaKnown RBP17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 MFAP5Q13361 173 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 KCNMB1Q16558 191 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 AGBL5Q8NDL9 886 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 NAT6Q93015 286 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 ALKBH3Q96Q83 286 aaPredicted RBP17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 SPIN2AQ99865 258 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 SPIN2BQ9BPZ2 258 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 VAMP8Q9BV40 100 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 RNF150Q9ULK6 438 aa17.73■□□□□ 0.43
TMEFF1-201ENST00000374879 B4DGG1 531 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 MRPS21P82921 87 aaKnown RBP17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 TMEM267Q0VDI3 215 aaPredicted RBP17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 GRINAQ7Z429 371 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 STPG4Q8N801 248 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 ZNF286AQ9HBT8 521 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 IGHV4-34P06331 123 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 TCN2P20062 427 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 DRD1P21728 446 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 IL3RAP26951 378 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 RANP62826 216 aaKnown RBP17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 H1FNTQ75WM6 255 aaPredicted RBP17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 VN1R17PQ8TDU5 208 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 CIB3Q96Q77 187 aaPredicted RBP17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 PARLQ9H300 379 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 SPAG17Q6Q759 2223 aa17.72■□□□□ 0.43
TMEFF1-201ENST00000374879 AQP7O14520 342 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 ANGPTL7O43827 346 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 HNF1AP20823 631 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 DTYMKP23919 212 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 GABREP78334 506 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 TLE3Q04726 772 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 ZP4Q12836 540 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 OR1L6Q8NGR2 347 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 CMTM2Q8TAZ6 248 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 ANAPC16Q96DE5 110 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 CLEC1BQ9P126 229 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 GON4LQ3T8J9 2241 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 IFNA1P01562 189 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 SRP14P37108 136 aaKnown RBP17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 HERV-K104P61576 105 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 MEF2BQ02080 365 aaPredicted RBP17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 OR5T1Q8NG75 326 aa17.71■□□□□ 0.43
TMEFF1-201ENST00000374879 SPTY2D1-AS1A0A0U1RR47 76 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 FRG2CA6NGY1 282 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 ALG1L2C9J202 215 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 TMEM41BQ5BJD5 291 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 TBC1D26Q86UD7 250 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 ADIPOR1Q96A54 375 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 MMABQ96EY8 250 aaPredicted RBP17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 TMEM56Q96MV1 263 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 PNRC2Q9NPJ4 139 aaKnown RBP17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 TMEM56-RWDD3S4R434 201 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 ARHGAP21Q5T5U3 1957 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 MDH2P40926 338 aaKnown RBP17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 NPBWR2P48146 333 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 SRPXP78539 464 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 TESK1Q15569 626 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 RSPO4Q2I0M5 234 aaPredicted RBP17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 FAM78BQ5VT40 261 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 SCGB1C1Q8TD33 95 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 TMEM9BQ9NQ34 198 aa17.7■□□□□ 0.42
TMEFF1-201ENST00000374879 A0A0U1RQK1 487 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 ZNF320A2RRD8 509 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 GRIFINA4D1Z8 144 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 CHRNA7P36544 502 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 KLF3P57682 345 aaPredicted RBP17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 RNF151Q2KHN1 245 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 ABHD14BQ96IU4 210 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 PXMP4Q9Y6I8 212 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 NXPH2O95156 264 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 GYPAP02724 150 aa17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 UBE2NP61088 152 aaKnown RBP17.69■□□□□ 0.42
TMEFF1-201ENST00000374879 PGAM5Q96HS1 289 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms