RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MRGPRDQ8TDS7 321 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 CCDC107Q8WV48 283 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 LHX4Q969G2 390 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 S100A16Q96FQ6 103 aaKnown RBP9.3□□□□□ -0.92
HSPG2-202ENST00000374676 CYYR1Q96J86 154 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 DIABLOQ9NR28 239 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 SIRT7Q9NRC8 400 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 MBNL3Q9NUK0 354 aaKnown RBP9.3□□□□□ -0.92
HSPG2-202ENST00000374676 CALYQ9NYX4 217 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 RSL24D1Q9UHA3 163 aaKnown RBP9.3□□□□□ -0.92
HSPG2-202ENST00000374676 AK3Q9UIJ7 227 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 NUP50Q9UKX7 468 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 TRAPPC2LQ9UL33 140 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 KCNK7Q9Y2U2 307 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 SESN1Q9Y6P5 492 aa9.3□□□□□ -0.92
HSPG2-202ENST00000374676 ATRQ13535 2644 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 CCDC160A6NGH7 325 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 SERPINE3A8MV23 424 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 RNASEK-C17orf49H0YIS7 233 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 CLPXO76031 633 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 APOA1P02647 267 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 GSTP1P09211 210 aaKnown RBP9.29□□□□□ -0.92
HSPG2-202ENST00000374676 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 IGHV4-38-2P0DP08 117 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 HIST1H1DP16402 221 aaKnown RBP9.29□□□□□ -0.92
HSPG2-202ENST00000374676 HOXB4P17483 251 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-202ENST00000374676 SRD5A1P18405 259 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 CDK2P24941 298 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 SCGB2A2Q13296 93 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 CDNFQ49AH0 187 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 OR52W1Q6IF63 320 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 HCP5Q6MZN7 132 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 ZNF880Q6PDB4 577 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 C9orf139Q6ZV77 190 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 RTN4RL2Q86UN3 420 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 SAMD12Q8N8I0 201 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 OR4K15Q8NH41 348 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 PHF21AQ96BD5 680 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 DGCR14Q96DF8 476 aaKnown RBP9.29□□□□□ -0.92
HSPG2-202ENST00000374676 CMSS1Q9BQ75 279 aaKnown RBP9.29□□□□□ -0.92
HSPG2-202ENST00000374676 RAB9BQ9NP90 201 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 CCDC59Q9P031 241 aaKnown RBP9.29□□□□□ -0.92
HSPG2-202ENST00000374676 COMMD3Q9UBI1 195 aa9.29□□□□□ -0.92
HSPG2-202ENST00000374676 A0A087X0M5 115 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 TRAV39A0A0B4J263 110 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 TRAV40A0A0B4J280 105 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 A0A1B0GX30 115 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 DPPA5A6NC42 116 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 C12orf77C9JDV5 145 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 C15orf65H3BRN8 121 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 F2RL2O00254 374 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 XRCC3O43542 346 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 MMP23AO75900 390 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 IGHV1-69P01742 117 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 CD3GP09693 182 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 GNB3P16520 340 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 RCC1P18754 421 aaPredicted RBP9.28□□□□□ -0.92
HSPG2-202ENST00000374676 CD34P28906 385 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 TUSC1Q2TAM9 212 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 ZNF260Q3ZCT1 412 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 OLFML2AQ68BL7 652 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 ZNF782Q6ZMW2 699 aaPredicted RBP9.28□□□□□ -0.92
HSPG2-202ENST00000374676 MOB1BQ7L9L4 216 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 OR11H6Q8NGC7 330 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 OR52M1Q8NGK5 317 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 OR13D1Q8NGV5 346 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 ARL11Q969Q4 196 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 KIRREL1Q96J84 757 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 TMEM133Q9H2Q1 129 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 C12orf4Q9NQ89 552 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 IDI2-AS1Q9NZ38 188 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 KCNIP1Q9NZI2 227 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 ZNF69Q9UC07 566 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 MGAT4AQ9UM21 535 aa9.28□□□□□ -0.92
HSPG2-202ENST00000374676 A0A075B6Q4 140 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 TRAV18A0A075B6X5 111 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 SPINT2O43291 252 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 MELTFP08582 738 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 EPHA1P21709 976 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 FPR2P25090 351 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 GDNFP39905 211 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 DLX1P56177 255 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 MRPS15P82914 257 aaKnown RBP9.27□□□□□ -0.93
HSPG2-202ENST00000374676 PITPNAQ00169 270 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 KLRD1Q13241 179 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 SRSF7Q16629 238 aaKnown RBP eCLIP9.27□□□□□ -0.93
HSPG2-202ENST00000374676 TMEM30BQ3MIR4 351 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 PRAMEF5Q5TYX0 476 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 HACD4Q5VWC8 232 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 Q6ZPA2 131 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 PNKDQ8N490 385 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 RFESDQ8TAC1 157 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 MS4A7Q9GZW8 240 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-202ENST00000374676 NXF2Q9GZY0 626 aaKnown RBP9.27□□□□□ -0.93
HSPG2-202ENST00000374676 AUNIPQ9H7T9 357 aa9.27□□□□□ -0.93
HSPG2-202ENST00000374676 ZMAT3Q9HA38 289 aaKnown RBP9.27□□□□□ -0.93
HSPG2-202ENST00000374676 TAF9BQ9HBM6 251 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms