RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 DHRS2Q13268 280 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 SURF2Q15527 256 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 OR4A4PQ8NGN8 299 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 ZNF431Q8TF32 576 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 DACT3Q96B18 629 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 KIRREL1Q96J84 757 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 ZNF69Q9UC07 566 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 TRAPPC2LQ9UL33 140 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 BET1O15155 118 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 GYPAP02724 150 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 IRF2P14316 349 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 SEC61A1P61619 476 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 C4orf46Q504U0 113 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 KRBOX4Q5JUW0 171 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 FAHD2BQ6P2I3 314 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 DTX2Q86UW9 622 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 OR13A1Q8NGR1 328 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 UBALD1Q8TB05 177 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 CCL17Q92583 94 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 FAHD2AQ96GK7 314 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 CCL13Q99616 98 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 TAF9BQ9HBM6 251 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 CBLN4Q9NTU7 201 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 C9orf170A2RU37 121 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 C12orf77C9JDV5 145 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 NPIPB11E5RHQ5 1161 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 LGALS8O00214 317 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 SSNA1O43805 119 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 UTP20O75691 2785 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 PPYP01298 95 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 TK1P04183 234 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 FGFRL1Q8N441 504 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 ZNF561Q8N587 486 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 PCDHB10Q9UN67 800 aa13.07□□□□□ -0.32
NIPAL3-204ENST00000374399 MEIKINA0A087WXM9 373 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 IGKV1D-13A0A0B4J2D9 117 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 IGHV1-69-2A0A0G2JMI3 117 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 A6NNC1 897 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 LYNX1G3V0Z9 82 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 MGST3O14880 152 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 CTXN2P0C2S0 81 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 IGKV1-13P0DP09 117 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 LYNX1P0DP58 116 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 AKR1C4P17516 323 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 COL8A2P25067 703 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 FAM53AQ6NSI3 398 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 FAM216BQ8N7L0 139 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 DMRTB1Q96MA1 342 aa13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 VRK1Q99986 396 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-204ENST00000374399 PPIAL4EA0A075B759 164 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 MEX3AA1L020 520 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 PPIAL4DF5H284 164 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 C15orf65H3BRN8 121 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 SIGLEC5O15389 551 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 HLA-AP01891 365 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 PPIAL4FP0DN26 164 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 ECI1P42126 302 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 GLP1RP43220 463 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 UCP3P55916 312 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 FXYD4P59646 89 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 EDDM3AQ14507 147 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 CR1LQ2VPA4 569 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 TMEM128Q5BJH2 165 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 MEX3BQ6ZN04 569 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 TCTE3Q8IZS6 198 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 SPICQ8N5J4 248 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 OR1L1Q8NH94 360 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 MRGPRDQ8TDS7 321 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 WDR89Q96FK6 387 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 SCGB3A2Q96PL1 93 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 TRAF4Q9BUZ4 470 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 MGAT4AQ9UM21 535 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 PPIAL4AQ9Y536 164 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 ODAMA1E959 279 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 RP2O75695 350 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 HEXAP06865 529 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 ZNF728P0DKX0 622 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 PGAM2P15259 253 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 TCF23Q7RTU1 214 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 OR2AK2Q8NG84 335 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 MITD1Q8WV92 249 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 TOMM40LQ969M1 308 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 RSRP1Q9BUV0 290 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 PARP12Q9H0J9 701 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 ZNF665Q9H7R5 613 aa13.05□□□□□ -0.32
NIPAL3-204ENST00000374399 PIPOXQ9P0Z9 390 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms