RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CCL11P51671 97 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 SOX8P57073 446 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 KIR2DS1Q14954 304 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 ZNF324BQ6AW86 544 aaPredicted RBP20.23■□□□□ 0.83
CDK9-201ENST00000373264 P4HA3Q7Z4N8 544 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 TMEM217Q8N7C4 229 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 LYPD6BQ8NI32 183 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 OTOGLQ3ZCN5 2332 aa20.23■□□□□ 0.83
CDK9-201ENST00000373264 BORCS7-ASMTA0A0B4J1R7 106 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 PROB1E7EW31 1015 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 TSPAN15O95858 294 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 PRH1P02810 166 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 TFF1P04155 84 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 WT1P19544 449 aaPredicted RBP20.22■□□□□ 0.83
CDK9-201ENST00000373264 IL24Q13007 206 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 NMSQ5H8A3 153 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 Q6P435 159 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 SCRT1Q9BWW7 348 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 ZDHHC11Q9H8X9 412 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 CDIPTO14735 213 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 DEGS1O15121 323 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 SNAPINO95295 136 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 ZNF806P0C7X5 589 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 CAMLGP49069 296 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 DHRS7BQ6IAN0 325 aaPredicted RBP20.22■□□□□ 0.83
CDK9-201ENST00000373264 FAM53AQ6NSI3 398 aaPredicted RBP20.22■□□□□ 0.83
CDK9-201ENST00000373264 FAM185AQ8N0U4 392 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 SCCPDHQ8NBX0 429 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 ESRP2Q9H6T0 727 aaKnown RBP20.22■□□□□ 0.83
CDK9-201ENST00000373264 CACFD1Q9UGQ2 172 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 MGAQ8IWI9 3026 aa20.22■□□□□ 0.83
CDK9-201ENST00000373264 OR5B21A6NL26 309 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 SMPD2O60906 423 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 SEC11BP0C7V7 166 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 TNFSF10P50591 281 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 PRELID1Q9Y255 219 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 UCP1P25874 307 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 PPP1CCP36873 323 aaKnown RBP20.21■□□□□ 0.83
CDK9-201ENST00000373264 RND3P61587 244 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 FAM76BQ5HYJ3 339 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 CXorf67Q86X51 503 aaPredicted RBP20.21■□□□□ 0.83
CDK9-201ENST00000373264 IP6K3Q96PC2 410 aa20.21■□□□□ 0.83
CDK9-201ENST00000373264 AGFG2O95081 481 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 PSG2P11465 335 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 PVALBP20472 110 aaPredicted RBP20.2■□□□□ 0.82
CDK9-201ENST00000373264 SNCAP37840 140 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 DVL1P1P54792 670 aaPredicted RBP20.2■□□□□ 0.82
CDK9-201ENST00000373264 SRSF7Q16629 238 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDK9-201ENST00000373264 FDCSPQ8NFU4 85 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 OR10J5Q8NHC4 309 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 POM121Q96HA1 1249 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 C19orf12Q9NSK7 152 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 TAAR3PQ9P1P4 343 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 CACNA1DQ01668 2161 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 SPAARA0A1B0GVQ0 90 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 H3BP45 60 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 OR2H2O95918 312 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 PPP1CBP62140 327 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 TBC1D28Q2M2D7 210 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 SPAG16Q8N0X2 631 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 TMEM252Q8N6L7 170 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 TRIB1Q96RU8 372 aa20.2■□□□□ 0.82
CDK9-201ENST00000373264 IGLV2-14P01704 120 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 GRPP07492 148 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 HLA-DRB3P79483 266 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 FAM213BQ8TBF2 198 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 SLC25A40Q8TBP6 338 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 OR2W1Q9Y3N9 320 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 CDRT15L2A8MXV6 281 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 J3QT63 122 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 ZNF154Q13106 437 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 H1FOOQ8IZA3 346 aaPredicted RBP20.19■□□□□ 0.82
CDK9-201ENST00000373264 OPA3Q9H6K4 179 aa20.19■□□□□ 0.82
CDK9-201ENST00000373264 MEX3AA1L020 520 aaKnown RBP20.18■□□□□ 0.82
CDK9-201ENST00000373264 GPR37O15354 613 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 CHST1O43916 411 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 MPV17P39210 176 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 SRPXP78539 464 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 RUNX1Q01196 453 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 Q6ZRM9 215 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 CMTM1Q8IZ96 169 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 CNEP1R1Q8N9A8 125 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 OR5C1Q8NGR4 320 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 NANOS1Q8WY41 292 aaKnown RBP20.18■□□□□ 0.82
CDK9-201ENST00000373264 C20orf24Q9BUV8 137 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 PPP1R3CQ9UQK1 317 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 TSPAN9O75954 239 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 H2AFB1P0C5Y9 115 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 F2RP25116 425 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 ATP6V0CP27449 155 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 CCL20P78556 96 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 ZNF880Q6PDB4 577 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 DEFB124Q8NES8 71 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 EIF5A2Q9GZV4 153 aaKnown RBP20.18■□□□□ 0.82
CDK9-201ENST00000373264 PLK3Q9H4B4 646 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 SAV1Q9H4B6 383 aaPredicted RBP20.18■□□□□ 0.82
CDK9-201ENST00000373264 SPACA1Q9HBV2 294 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 FZR1Q9UM11 496 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 FBXO7Q9Y3I1 522 aa20.18■□□□□ 0.82
CDK9-201ENST00000373264 VDAC1P21796 283 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms