RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FAM185AQ8N0U4 392 aa21.09■□□□□ 0.97
CTSA-203ENST00000372459 RND1Q92730 232 aa21.09■□□□□ 0.97
CTSA-203ENST00000372459 MAP1BP46821 2468 aaKnown RBP21.08■□□□□ 0.97
CTSA-203ENST00000372459 LMO1P25800 156 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 TAGLNQ01995 201 aaKnown RBP21.08■□□□□ 0.97
CTSA-203ENST00000372459 TMEM108Q6UXF1 575 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 SSX8Q7RTT4 187 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 ZNF565Q8N9K5 539 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 DMRTA2Q96SC8 542 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 CABLES2Q9BTV7 478 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 TAAR3PQ9P1P4 343 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 TRAPPC2LQ9UL33 140 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 PIEZO2Q9H5I5 2752 aa21.08■□□□□ 0.97
CTSA-203ENST00000372459 RP1L1Q8IWN7 2480 aaPredicted RBP21.08■□□□□ 0.96
CTSA-203ENST00000372459 MPTX1A8MV57 137 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 OR5AC1P0C628 307 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 SELENOVP59797 346 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 TMEM187Q14656 261 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 ATXN7L3Q14CW9 347 aaPredicted RBP21.08■□□□□ 0.96
CTSA-203ENST00000372459 SMIM21Q3B7S5 101 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 PCSK4Q6UW60 755 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 OR10C1Q96KK4 312 aa21.08■□□□□ 0.96
CTSA-203ENST00000372459 PTBP3O95758 552 aaKnown RBP21.07■□□□□ 0.96
CTSA-203ENST00000372459 GNRHRP30968 328 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 KCNJ3P48549 501 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 CEBPDP49716 269 aaPredicted RBP21.07■□□□□ 0.96
CTSA-203ENST00000372459 ACOT7LQ6ZUV0 252 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 OR11L1Q8NGX0 322 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 OR10J5Q8NHC4 309 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 PRR7Q8TB68 274 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 SECTM1Q8WVN6 248 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 PHYHIPLQ96FC7 376 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 VKORC1Q9BQB6 163 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 SHARPINQ9H0F6 387 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 MBD2Q9UBB5 411 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 MEMO1Q9Y316 297 aa21.07■□□□□ 0.96
CTSA-203ENST00000372459 TRBV6-7A0A0A0MS04 114 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 DLL1O00548 723 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 IFNA21P01568 189 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 KLRB1Q12918 225 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 LRRC29Q8WV35 223 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 DNTTIP1Q9H147 329 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 WIPI2Q9Y4P8 454 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 RNF222A6NCQ9 220 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 PTAFRP25105 342 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 TUSC1Q2TAM9 212 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 SP6Q3SY56 376 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 NUP37Q8NFH4 326 aa21.06■□□□□ 0.96
CTSA-203ENST00000372459 GPR31O00270 319 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 PSPNO60542 156 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 RND3P61587 244 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 LIAT1Q6ZQX7 453 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 LRTM2Q8N967 370 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.05■□□□□ 0.96
CTSA-203ENST00000372459 OR10Z1Q8NGY1 313 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 KIRREL1Q96J84 757 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 SLC5A7Q9GZV3 580 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 MBNL3Q9NUK0 354 aaKnown RBP21.05■□□□□ 0.96
CTSA-203ENST00000372459 IFNL4K9M1U5 179 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 MPPED1O15442 326 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 WFDC8Q8IUA0 241 aa21.05■□□□□ 0.96
CTSA-203ENST00000372459 INO80EQ8NBZ0 244 aaPredicted RBP21.05■□□□□ 0.96
CTSA-203ENST00000372459 MRPL37Q9BZE1 423 aaKnown RBP21.05■□□□□ 0.96
CTSA-203ENST00000372459 IGKV1D-13A0A0B4J2D9 117 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 NPIPB11E5RHQ5 1161 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 IGKV1-13P0DP09 117 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 CASP6P55212 293 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 H1FOOQ8IZA3 346 aaPredicted RBP21.04■□□□□ 0.96
CTSA-203ENST00000372459 MEGF10Q96KG7 1140 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 OR2V2Q96R30 315 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 OR2W1Q9Y3N9 320 aa21.04■□□□□ 0.96
CTSA-203ENST00000372459 TRGV8A0A0C4DH27 118 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 TMEM30CPA0ZSE6 113 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 PHF1O43189 567 aaPredicted RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 CFHR2P36980 270 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 HOXA4Q00056 320 aaPredicted RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 IAH1Q2TAA2 248 aaPredicted RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 GGNBP1Q5YKI7 109 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 ZNF818PQ6ZRF7 136 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 LGI3Q8N145 548 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 GLYATL2Q8WU03 294 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 IL1F10Q8WWZ1 152 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 COQ3Q9NZJ6 369 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 GSKIPQ9P0R6 139 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 TRAV39A0A0B4J263 110 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 C3orf85A0A1B0GTC6 90 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 SPRY3O43610 288 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 PET100P0DJ07 73 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 LUMP51884 338 aaPredicted RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 IL15RAQ13261 267 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 LDLRAD3Q86YD5 345 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 DCUN1D4Q92564 292 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 MRPL24Q96A35 216 aaKnown RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 MSI2Q96DH6 328 aaKnown RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 RNF126Q9BV68 326 aa21.03■□□□□ 0.96
CTSA-203ENST00000372459 FBXO9Q9UK97 447 aaPredicted RBP21.03■□□□□ 0.96
CTSA-203ENST00000372459 SRRM5B3KS81 715 aa21.02■□□□□ 0.96
CTSA-203ENST00000372459 HMGN3Q15651 99 aa21.02■□□□□ 0.96
CTSA-203ENST00000372459 SMUG1Q53HV7 270 aa21.02■□□□□ 0.96
CTSA-203ENST00000372459 SLC35E4Q6ICL7 350 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms