RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 SERPINF1P36955 418 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CCL8P80075 99 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 SORDQ00796 357 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 PHLDA2Q53GA4 152 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 MOB1BQ7L9L4 216 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 FAM90A1Q86YD7 464 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 Q8TCH9 128 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 TMEM246Q9BRR3 403 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CLEC4MQ9H2X3 399 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 KCNJ16Q9NPI9 418 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 SLC2A9Q9NRM0 540 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 OR1A1Q9P1Q5 309 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 KIF25Q9UIL4 384 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 PCDHB10Q9UN67 800 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 HRNRQ86YZ3 2850 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 A0A0B4J2A0 478 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CYB5R3P00387 301 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CD3EP07766 207 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CD55P08174 381 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CTXN2P0C2S0 81 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 CD80P33681 288 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 HERV-K104P61576 105 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 TLE1Q04724 770 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 HMGN3Q15651 99 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 MST1LQ2TV78 715 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 LGALSLQ3ZCW2 172 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 LPCAT3Q6P1A2 487 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 H1FOOQ8IZA3 346 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 SLC38A6Q8IZM9 456 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 TPRX1Q8N7U7 411 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 LILRB1Q8NHL6 650 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-202ENST00000372405 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 PIK3IP1Q96FE7 263 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 SEC22AQ96IW7 307 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 DNAJB11Q9UBS4 358 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 SHPKQ9UHJ6 478 aa11.54□□□□□ -0.56
PTPRF-202ENST00000372405 ABCA4P78363 2273 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 TRAV14DV4A0A0A6YYC5 116 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 TMEM30CPA0ZSE6 113 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 MPTX1A8MV57 137 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 ADAP1O75689 374 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 CD8AP01732 235 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 TNFSF4P23510 183 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 GLIPR1P48060 266 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 PRR18Q8N4B5 295 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 ASCC1Q8N9N2 400 aaKnown RBP11.53□□□□□ -0.56
PTPRF-202ENST00000372405 ANGPTL6Q8NI99 470 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 RTN4IP1Q8WWV3 396 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-202ENST00000372405 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-202ENST00000372405 TAF9BQ9HBM6 251 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 RNF7Q9UBF6 113 aa11.53□□□□□ -0.56
PTPRF-202ENST00000372405 DEFB108AA8MXU0 73 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 M0R233 179 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 DIRAS3O95661 229 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 IFNA2P01563 188 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 GNLYP22749 145 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 LRBAP50851 2863 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 SGPP2Q8IWX5 399 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 OR10J5Q8NHC4 309 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 DSCAML1Q8TD84 2053 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 SECTM1Q8WVN6 248 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 ASB13Q8WXK3 278 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 NAA60Q9H7X0 242 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 PPP1R3CQ9UQK1 317 aa11.52□□□□□ -0.56
PTPRF-202ENST00000372405 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-202ENST00000372405 TUBAL3A6NHL2 446 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 C12orf77C9JDV5 145 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 RGS11O94810 467 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 SELLP14151 372 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 PAX5Q02548 391 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 SP6Q3SY56 376 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 ABCA11PQ4W5N1 156 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 ZNF818PQ6ZRF7 136 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 ZNRF1Q8ND25 227 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 COQ8AQ8NI60 647 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 ERGIC1Q969X5 290 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 GALNT14Q96FL9 552 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 DIRC2Q96SL1 478 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 PARP12Q9H0J9 701 aaKnown RBP11.52□□□□□ -0.57
PTPRF-202ENST00000372405 RNF115Q9Y4L5 304 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 MAB21L2Q9Y586 359 aa11.52□□□□□ -0.57
PTPRF-202ENST00000372405 TANC2Q9HCD6 1990 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 A0A1B0GW55 424 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 FAM25EA8MYX2 175 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 OR5AC1P0C628 307 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 DUX4L2P0CJ85 424 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 DUX4L3P0CJ86 424 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 DUX4L4P0CJ87 422 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 DUX4L5P0CJ88 424 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 DUX4L6P0CJ89 424 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 DUX4L7P0CJ90 424 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 GABRA2P47869 451 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 TESK1Q15569 626 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 BEX5Q5H9J7 111 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
PTPRF-202ENST00000372405 STUMQ69YW2 141 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms