RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 AQP3Q92482 292 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 SLAMF9Q96A28 289 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 PTX4Q96A99 478 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 Q96MF0 132 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 GAL3ST1Q99999 423 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 MICU1Q9BPX6 476 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 NICN1Q9BSH3 213 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 RTL8AQ9BWD3 113 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 GON7Q9BXV9 100 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 LPAR5Q9H1C0 372 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ABCG5Q9H222 651 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CXXC4Q9H2H0 198 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CISD1Q9NZ45 108 aaKnown RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 EXTL2Q9UBQ6 330 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 RAB22AQ9UL26 194 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 KLF2Q9Y5W3 355 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 ETV7Q9Y603 341 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CACNA1DQ01668 2161 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CELSR2Q9HCU4 2923 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 GCN1Q92616 2671 aaKnown RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 A0A0G2JMP0 313 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 A0A0X1KG70 313 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 LRP5LA4QPB2 252 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 FABP12A6NFH5 140 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 OR5B21A6NL26 309 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 LINC00473A8K010 186 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 FOXI3A8MTJ6 420 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 J3QT63 122 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CDIPTO14735 213 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CTAG2O75638 210 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CRTAPO75718 401 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 CD8AP01732 235 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 HLA-DQB1P01920 261 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 RLN1P04808 185 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 UBBP0CG47 229 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 EGR2P11161 476 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 PTHLHP12272 177 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 BCL3P20749 454 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 MPZP25189 248 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CD200P41217 278 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 CBX5P45973 191 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 TMEM50BP56557 158 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 SELENOVP59797 346 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ERVK11-1P61568 191 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 RPS27AP62979 156 aaKnown RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 IL24Q13007 206 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ZNF154Q13106 437 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ZNF846Q147U1 533 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 EFNB3Q15768 340 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 PNLIPRP3Q17RR3 467 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 OR2W3Q7Z3T1 314 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 LRRC28Q86X40 367 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 ZNF573Q86YE8 665 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 TGIF2LYQ8IUE0 185 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 SAXO1Q8IYX7 474 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 FAM89BQ8N5H3 189 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ZNF611Q8N823 705 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ZSCAN4Q8NAM6 433 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 OR4M2Q8NGB6 313 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 KCNG3Q8TAE7 436 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ITLN1Q8WWA0 313 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 PCGF1Q9BSM1 259 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 PKIBQ9C010 78 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 SRRQ9GZT4 340 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 SLC22A4Q9H015 551 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 METTL9Q9H1A3 318 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 TLNRD1Q9H1K6 362 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ATG5Q9H1Y0 275 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ELL3Q9HB65 397 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 NEK6Q9HC98 313 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 UFSP2Q9NUQ7 469 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 RBFOX1Q9NWB1 397 aaKnown RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 IL36RNQ9UBH0 155 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 GHRLQ9UBU3 117 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 ELF5Q9UKW6 265 aaPredicted RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 NUP50Q9UKX7 468 aa2.97□□□□□ -1.93
MCF2-202ENST00000370573 NOP16Q9Y3C1 178 aaKnown RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 STRAPQ9Y3F4 350 aaKnown RBP2.97□□□□□ -1.93
MCF2-202ENST00000370573 AKAP6Q13023 2319 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TRAV18A0A075B6X5 111 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PLSCR5A0PG75 271 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TMEM210A6NLX4 147 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 A6NNC1 897 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PRSS44E7EML9 344 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 J3QKU1 62 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 WNT9BO14905 357 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 SOCS1O15524 211 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 XRCC3O43542 346 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 LANCL1O43813 399 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 ECDO95905 644 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 DANCRP0C864 163 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 HKR1P10072 659 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MGMTP16455 207 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 SERPINA2P20848 420 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 VEGFCP49767 419 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 ZNF45Q02386 682 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 RSU1Q15404 277 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PIGYQ3MUY2 71 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PLAC9Q5JTB6 97 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 SPANXN2Q5MJ10 180 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms