RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
SSR4-204ENST00000370087 TMEM163Q8TC26 289 aa11.93□□□□□ -0.5
SSR4-204ENST00000370087 TRUB1Q8WWH5 349 aaKnown RBP11.93□□□□□ -0.5
SSR4-204ENST00000370087 S1PR3Q99500 378 aa11.93□□□□□ -0.5
SSR4-204ENST00000370087 GON7Q9BXV9 100 aa11.93□□□□□ -0.5
SSR4-204ENST00000370087 ALX4Q9H161 411 aaPredicted RBP11.93□□□□□ -0.5
SSR4-204ENST00000370087 ZNF581Q9P0T4 197 aa11.93□□□□□ -0.5
SSR4-204ENST00000370087 HERC2O95714 4834 aa11.93□□□□□ -0.5
SSR4-204ENST00000370087 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 H0YJX3 145 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 VDAC1P21796 283 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 F2RL1P55085 397 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 ZNF616Q08AN1 781 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 TP53I3Q53FA7 332 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 RSBN1Q5VWQ0 802 aaPredicted RBP11.92□□□□□ -0.5
SSR4-204ENST00000370087 ZNF429Q86V71 674 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 FAM71E2Q8N5Q1 922 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 OR51A4Q8NGJ6 313 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 RFKQ969G6 155 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 SPSB1Q96BD6 273 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 ISOC1Q96CN7 298 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 IL4I1Q96RQ9 567 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 NEK6Q9HC98 313 aa11.92□□□□□ -0.5
SSR4-204ENST00000370087 SMPD3Q9NY59 655 aaPredicted RBP11.92□□□□□ -0.5
SSR4-204ENST00000370087 MPZL2O60487 215 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 SAP30O75446 220 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
SSR4-204ENST00000370087 ZNF20P17024 532 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 SLURP1P55000 103 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 NANOS3P60323 173 aaKnown RBP11.91□□□□□ -0.5
SSR4-204ENST00000370087 ZP1P60852 638 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 SRSF7Q16629 238 aaKnown RBP eCLIP11.91□□□□□ -0.5
SSR4-204ENST00000370087 LRRC36Q1X8D7 754 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 ZIK1Q3SY52 487 aaPredicted RBP11.91□□□□□ -0.5
SSR4-204ENST00000370087 PAN3Q58A45 887 aaKnown RBP11.91□□□□□ -0.5
SSR4-204ENST00000370087 HAPLN4Q86UW8 402 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 OR10H4Q8NGA5 316 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 OR13C9Q8NGT0 318 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 UBALD1Q8TB05 177 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 MBOAT4Q96T53 435 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
SSR4-204ENST00000370087 GMPPBQ9Y5P6 360 aa11.91□□□□□ -0.5
SSR4-204ENST00000370087 G3V318 75 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 OVOL1O14753 267 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 SULT1C4O75897 302 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 IGF1P05019 195 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 C21orf33P30042 268 aaPredicted RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 PPIFP30405 207 aaKnown RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 POLR2IP36954 125 aaKnown RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 RUNX1Q01196 453 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 ZNF85Q03923 595 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 SAXO1Q8IYX7 474 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 ZNF565Q8N9K5 539 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 OR2G2Q8NGZ5 317 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 RTN4IP1Q8WWV3 396 aaPredicted RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 DLX4Q92988 240 aaPredicted RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 ST6GALNAC6Q969X2 333 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 UBE2E2Q96LR5 201 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 NR1H4Q96RI1 486 aaPredicted RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 SLC29A1Q99808 456 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 RASL11BQ9BPW5 248 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 GNG8Q9UK08 70 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 MYRFQ9Y2G1 1151 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
SSR4-204ENST00000370087 WSB1Q9Y6I7 421 aa11.9□□□□□ -0.5
SSR4-204ENST00000370087 LOC100130705A0A1B0GUX0 176 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
SSR4-204ENST00000370087 SLC31A2O15432 143 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 MOSP00540 346 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 OR2T7P0C7T2 308 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 IGHV4-30-4P0DP06 118 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 SOX6P35712 828 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 TMED1Q13445 227 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 MEDAGQ5VYS4 303 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 TTC23Q5W5X9 447 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 LPCAT4Q643R3 524 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 CNIH3Q8TBE1 160 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 Q96MT0 163 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 FRRS1LQ9P0K9 344 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
SSR4-204ENST00000370087 ZNF580Q9UK33 172 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
SSR4-204ENST00000370087 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 MAGEA13PA6NCF6 341 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 LDLRAD4O15165 306 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 MT-ND2P03891 347 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 SLC2A2P11168 524 aaPredicted RBP11.88□□□□□ -0.51
SSR4-204ENST00000370087 MYF6P23409 242 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 CD1BP29016 333 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 VEGFCP49767 419 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 PIGYQ3MUY2 71 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 OGFRL1Q5TC84 451 aaPredicted RBP11.88□□□□□ -0.51
SSR4-204ENST00000370087 TMEM244Q5VVB8 128 aa11.88□□□□□ -0.51
SSR4-204ENST00000370087 SLC16A12Q6ZSM3 486 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms