RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MTPNP58546 118 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 SNRPD1P62314 119 aaKnown RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 BTN3A2P78410 334 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CDK3Q00526 305 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 AKR1C1Q04828 323 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 MELKQ14680 651 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ELOCQ15369 112 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 CST6Q15828 149 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 FAAP20Q6NZ36 180 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 TNFAIP8L2Q6P589 184 aaPredicted RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 Q6ZSR9 355 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 IZUMO1Q8IYV9 350 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR10G4Q8NGN3 311 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF519Q8TB69 540 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ABHD5Q8WTS1 349 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 PTX4Q96A99 478 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 ATOH8Q96SQ7 321 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 SCRT1Q9BWW7 348 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 NXF5Q9H1B4 397 aaKnown RBP4.36□□□□□ -1.71
UBE3D-202ENST00000369746 MEGF9Q9H1U4 602 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 BET1LQ9NYM9 111 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR1A1Q9P1Q5 309 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 FBLN5Q9UBX5 448 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 OR51B2Q9Y5P1 312 aa4.36□□□□□ -1.71
UBE3D-202ENST00000369746 SPTY2D1-AS1A0A0U1RR47 76 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 A0A1W2PNU3 283 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM235A6NFC5 223 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 H3BS24 57 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 K7EPK0 472 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TNFRSF13BO14836 293 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 EFNA2O43921 213 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 OR7C2O60412 319 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ALOX12BO75342 701 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ATP1B1P05026 303 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 KITLGP21583 273 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 CYCSP99999 105 aaKnown RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 BAXQ07812 192 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 HSPB3Q12988 150 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 POU2AF1Q16633 256 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 LRRC75BQ2VPJ9 315 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ACOT6Q3I5F7 207 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM52BQ4KMG9 183 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM128Q5BJH2 165 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 DMRTC1Q5HYR2 192 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 UBE2NLQ5JXB2 153 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 LYPLAL1Q5VWZ2 237 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SP5Q6BEB4 398 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 MARCH9Q86YJ5 346 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 RNF175Q8N4F7 328 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 FAM71E2Q8N5Q1 922 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SLC16A11Q8NCK7 471 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 OR52L1Q8NGH7 329 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 NEIL2Q969S2 332 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 MRAP2Q96G30 205 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 PYGO2Q9BRQ0 406 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TNFRSF12AQ9NP84 129 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 HINT3Q9NQE9 182 aaKnown RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 WRAP73Q9P2S5 460 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 UQCR10Q9UDW1 63 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 NTNG1Q9Y2I2 539 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 FCF1Q9Y324 198 aaKnown RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 IGHV1-69-2A0A0G2JMI3 117 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TLCD2A6NGC4 264 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 C2CD4BA6NLJ0 364 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF814B7Z6K7 855 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 UMAD1C9J7I0 102 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SLC16A7O60669 478 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SCGNO76038 276 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 CD160O95971 181 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 OR4A8P0C604 315 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 COX6B1P14854 86 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 PRPH2P23942 346 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 MIPP30301 263 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 DGCR2P98153 550 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ZXDBP98169 803 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF415Q09FC8 603 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 PNRC1Q12796 327 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF154Q13106 437 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ELOA3BQ3SY89 546 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 CPTPQ5TA50 214 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 GFI1BQ5VTD9 330 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SFXN4Q6P4A7 337 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 DUX4L9Q6RFH8 374 aaPredicted RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SEM1Q6ZVN7 128 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 DND1Q8IYX4 353 aaKnown RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ELOA3Q8NG57 546 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 OR10V1Q8NGI7 309 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 OR51A2Q8NGJ7 313 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 OR6T1Q8NGN1 323 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 FRZBQ92765 325 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SARAFQ96BY9 339 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 ATXN7L3BQ96GX2 97 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SLC35G5Q96KT7 338 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 SIGMAR1Q99720 223 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 TBL1YQ9BQ87 522 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 KCNJ16Q9NPI9 418 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 CYTL1Q9NRR1 136 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 GNG12Q9UBI6 72 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms