RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 MRPL30Q8TCC3 161 aaKnown RBP13.91□□□□□ -0.18
CHD1L-203ENST00000369259 SPPL3Q8TCT6 385 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 SPSB1Q96BD6 273 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 PINX1Q96BK5 328 aaKnown RBP13.91□□□□□ -0.18
CHD1L-203ENST00000369259 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 GYPAP02724 150 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 TCN2P20062 427 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 ZNF542PQ5EBM4 170 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 Q6ZSR6 202 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 GPHA2Q96T91 129 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 PLK3Q9H4B4 646 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 MSL2Q9HCI7 577 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 IGKV1-27A0A075B6S5 117 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 PIAS2O75928 621 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 IL3RAP26951 378 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 GCH1P30793 250 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 TFPI2P48307 235 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 PSMB3P49720 205 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 RBX1P62877 108 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
CHD1L-203ENST00000369259 DLX2Q07687 328 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-203ENST00000369259 LRRC75BQ2VPJ9 315 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 GAPTQ8N292 157 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 OSR2Q8N2R0 312 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 ZNF525Q8N782 197 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 AGBL5Q8NDL9 886 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 RAB40CQ96S21 281 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 AURKAIP1Q9NWT8 199 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-203ENST00000369259 PXMP4Q9Y6I8 212 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 DOCK8Q8NF50 2099 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 EFNA2O43921 213 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 YPEL5P62699 121 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 C17orf67Q0P5P2 114 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 MALLQ13021 153 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 HIST3H3Q16695 136 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 ASCL4Q6XD76 172 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 OR1N1Q8NGS0 311 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 CMTM2Q8TAZ6 248 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-203ENST00000369259 WDYHV1Q96HA8 205 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 OBP2AQ9NY56 170 aa13.9□□□□□ -0.18
CHD1L-203ENST00000369259 PDCD6O75340 191 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 PDGFBP01127 241 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-203ENST00000369259 POU2F2P09086 479 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 CD33P20138 364 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 EFNA3P52797 238 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 RPS18P62269 152 aaKnown RBP13.89□□□□□ -0.19
CHD1L-203ENST00000369259 RSPO4Q2I0M5 234 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-203ENST00000369259 ALKBH2Q6NS38 261 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 GJC3Q8NFK1 279 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 GAL3ST2Q9H3Q3 398 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 PAM16Q9Y3D7 125 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 A0A0U1RQK1 487 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 COL9A1P20849 921 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 CHRNB4P30926 498 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 SUMO3P55854 103 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-203ENST00000369259 RNPS1Q15287 305 aaKnown RBP13.89□□□□□ -0.19
CHD1L-203ENST00000369259 TESK1Q15569 626 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 NSDHLQ15738 373 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 RSPO1Q2MKA7 263 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-203ENST00000369259 FAM78BQ5VT40 261 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 Q6ZWC4 215 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 CALHM1Q8IU99 346 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 ADPRHL1Q8NDY3 354 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 OR5D13Q8NGL4 314 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 C22orf15Q8WYQ4 148 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 BTF3L4Q96K17 158 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 GABRG3Q99928 467 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 VAMP8Q9BV40 100 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 ST3GAL6Q9Y274 331 aa13.89□□□□□ -0.19
CHD1L-203ENST00000369259 TCRBV21S2A2A0A5A6 115 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 VENTXO95231 258 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 CNOT4O95628 575 aaKnown RBP13.88□□□□□ -0.19
CHD1L-203ENST00000369259 NTSR1P30989 418 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 PAFAH1B2P68402 229 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 TLE1Q04724 770 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 RNASE8Q8TDE3 154 aaKnown RBP13.88□□□□□ -0.19
CHD1L-203ENST00000369259 SOHLH2Q9NX45 425 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 IGKV1-12A0A0C4DH73 117 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 IGKV1D-12P01611 117 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 OPN1LWP04000 364 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 TPPP2P59282 170 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 ARL16Q0P5N6 197 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 SSPNQ14714 243 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 PDCD1Q15116 288 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 CNN3Q15417 329 aaKnown RBP13.88□□□□□ -0.19
CHD1L-203ENST00000369259 OR13H1Q8NG92 308 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 OR4F5Q8NH21 305 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 SLC35E1Q96K37 410 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 OR4F4Q96R69 305 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 ZNF442Q9H7R0 627 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 PLA2G3Q9NZ20 509 aa13.88□□□□□ -0.19
CHD1L-203ENST00000369259 FOXJ2Q9P0K8 574 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms