RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ZNF695Q8IW36 515 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 SYS1Q8N2H4 156 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 COMMD1Q8N668 190 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 OR51A2Q8NGJ7 313 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 FBLIM1Q8WUP2 373 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 PYDC1Q8WXC3 89 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 CPNE2Q96FN4 548 aaPredicted RBP8.15□□□□□ -1.1
CLRN3-201ENST00000368671 MYCBPQ99417 103 aaPredicted RBP8.15□□□□□ -1.1
CLRN3-201ENST00000368671 P2RX4Q99571 388 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 NCOR1P1Q9H4R4 102 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 FAM118AQ9NWS6 357 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 TAS2R4Q9NYW5 299 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 ZNF581Q9P0T4 197 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 IGHV1-3A0A0C4DH29 117 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 H0YHG0 523 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 CCRL2O00421 344 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 CDRT1O95170 752 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 GAPDHP04406 335 aaKnown RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 SLC6A1P30531 599 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 GBX2P52951 348 aaPredicted RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 ZNF816Q0VGE8 651 aaPredicted RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 DCTN2Q13561 401 aaKnown RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 SLC16A12Q6ZSM3 486 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 LCNL1Q6ZST4 164 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 SUMF2Q8NBJ7 301 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 OR10A7Q8NGE5 316 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 UBALD1Q8TB05 177 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 WDR89Q96FK6 387 aaPredicted RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 RAX2Q96IS3 184 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 EAF1Q96JC9 268 aaPredicted RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 DPCDQ9BVM2 203 aaPredicted RBP8.14□□□□□ -1.11
CLRN3-201ENST00000368671 LINC00574Q9H8X3 128 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 AMBNQ9NP70 447 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 ERVK13-1Q9NX77 482 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 ING4Q9UNL4 249 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 GMPPBQ9Y5P6 360 aa8.14□□□□□ -1.11
CLRN3-201ENST00000368671 IGHV3-43A0A0B4J1X8 118 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 TMEM30CPA0ZSE6 113 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 CCL24O00175 119 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 AP4M1O00189 453 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 SDCBPO00560 298 aaPredicted RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 ATP5HO75947 161 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 OR7C1O76099 320 aaPredicted RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 RPSAP08865 295 aaKnown RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 IGHV3-43DP0DP04 118 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 GPR12P47775 334 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 KCNJ3P48549 501 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 ALDH3A2P51648 485 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 LUMP51884 338 aaPredicted RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 GTF2A1P52655 376 aaPredicted RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 MRPL28Q13084 256 aaKnown RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 ATAD3CQ5T2N8 411 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 FAM53AQ6NSI3 398 aaPredicted RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 TEX38Q6PEX7 206 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 Q8N9W7 124 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 OR2T10Q8NGZ9 312 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 NEK7Q8TDX7 302 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 CCDC107Q8WV48 283 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 ARL11Q969Q4 196 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 JAM3Q9BX67 310 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 METTL9Q9H1A3 318 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 DCLRE1BQ9H816 532 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 LIN7CQ9NUP9 197 aaKnown RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 ZMAT5Q9UDW3 170 aaKnown RBP8.13□□□□□ -1.11
CLRN3-201ENST00000368671 ST3GAL6Q9Y274 331 aa8.13□□□□□ -1.11
CLRN3-201ENST00000368671 GEMIN2O14893 280 aaKnown RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 MPZL2O60487 215 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 RAMP3O60896 148 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 FADS2O95864 444 aaKnown RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 CSTBP04080 98 aaKnown RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 GABRB1P18505 474 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 SERPINA2P20848 420 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 IL3RAP26951 378 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 RBM11P57052 281 aaKnown RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 PAX5Q02548 391 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 GPR50Q13585 617 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 EBI3Q14213 229 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 PNLIPRP3Q17RR3 467 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 CXorf66Q5JRM2 361 aaPredicted RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 DDI2Q5TDH0 399 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 ZNF529Q6P280 563 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 TGIF2LXQ8IUE1 241 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 IZUMO1Q8IYV9 350 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 Q8N6K4 173 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 OR52I1Q8NGK6 324 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 OR5M8Q8NGP6 311 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 OR52N1Q8NH53 320 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 RGP1Q92546 391 aaPredicted RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 RBMXL1Q96E39 390 aaKnown RBP8.12□□□□□ -1.11
CLRN3-201ENST00000368671 PRR25Q96S07 402 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 S100A13Q99584 98 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 RASL11BQ9BPW5 248 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 ABCG5Q9H222 651 aa8.12□□□□□ -1.11
CLRN3-201ENST00000368671 DNAH9Q9NYC9 4486 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 C15orf65H3BRN8 121 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 AIPO00170 330 aa8.11□□□□□ -1.11
CLRN3-201ENST00000368671 SLC31A2O15432 143 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms