RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 HRASP01112 189 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 LCATP04180 440 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
SHC1-205ENST00000368453 SLC25A47Q6Q0C1 308 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 WDR5BQ86VZ2 330 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 C11orf1Q9H5F2 150 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 ID3Q02535 119 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 ENDOGQ14249 297 aaKnown RBP12.93□□□□□ -0.34
SHC1-205ENST00000368453 SHHQ15465 462 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 GBGT1Q8N5D6 347 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 TWSG1Q9GZX9 223 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 SLC25A22Q9H936 323 aa12.93□□□□□ -0.34
SHC1-205ENST00000368453 GRIFINA4D1Z8 144 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 TMEM210A6NLX4 147 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 ZNF16P17020 682 aaPredicted RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 COA6Q5JTJ3 125 aaKnown RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 PARM1Q6UWI2 310 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 SIGLEC12Q96PQ1 595 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 PARLQ9H300 379 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 MSL2Q9HCI7 577 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 IGKV1-27A0A075B6S5 117 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 NUPR1O60356 82 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 FBLP22087 321 aaKnown RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 YPEL5P62699 121 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 HIST1H3AP68431 136 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 SPANXN5Q5MJ07 72 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 CYP2G1PQ6ZSU1 146 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 GATAD1Q8WUU5 269 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 PIGCQ92535 297 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 OR6C3Q9NZP0 311 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 PCDH15Q96QU1 1955 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 IGHV3-15A0A0B4J1V0 119 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 SERPINE2P07093 398 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 TCN2P20062 427 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 MSR1P21757 451 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 PSMB3P49720 205 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 PAX9P55771 341 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 HNRNPKP61978 463 aaKnown RBP eCLIP12.92□□□□□ -0.348e-9■■□□□ 12.1
SHC1-205ENST00000368453 OR8G2PQ6IF36 304 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 TGIF2LYQ8IUE0 185 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 MAML2Q8IZL2 1156 aaPredicted RBP12.92□□□□□ -0.34
SHC1-205ENST00000368453 VN1R17PQ8TDU5 208 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 DNASE2BQ8WZ79 361 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 P2RX4Q99571 388 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 PPIAL4AQ9Y536 164 aa12.92□□□□□ -0.34
SHC1-205ENST00000368453 CABIN1Q9Y6J0 2220 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 TRAV1-1A0A0B4J248 108 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 SCTP09683 121 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 EGR1P18146 543 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 UCP3P55916 312 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 FAM69BQ5VUD6 431 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 C11orf42Q8N5U0 333 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 METTL7AQ9H8H3 244 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 TUBG2Q9NRH3 451 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 IGKV1-12A0A0C4DH73 117 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 TP53I11O14683 189 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 KBTBD11O94819 623 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 IGKV1D-12P01611 117 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 CAPZBP47756 277 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 PMP22Q01453 160 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 CARFQ8N187 725 aa12.91□□□□□ -0.34
SHC1-205ENST00000368453 IGKV1D-13A0A0B4J2D9 117 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
SHC1-205ENST00000368453 GYPAP02724 150 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 PATE4P0C8F1 98 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 IGKV1-13P0DP09 117 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 CD82P27701 267 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 GCH1P30793 250 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
SHC1-205ENST00000368453 SP5Q6BEB4 398 aaPredicted RBP12.9□□□□□ -0.34
SHC1-205ENST00000368453 SPTSSAQ969W0 71 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 TMEM56Q96MV1 263 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 PSENENQ9NZ42 101 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 TMEM56-RWDD3S4R434 201 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 IGKV3D-11A0A0A0MRZ8 115 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 NPIPB4C9JG80 1138 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 PDCD6O75340 191 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 RPS16P62249 146 aaKnown RBP12.9□□□□□ -0.34
SHC1-205ENST00000368453 CNN3Q15417 329 aaKnown RBP12.9□□□□□ -0.34
SHC1-205ENST00000368453 ACTL10Q5JWF8 245 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 OR2J1Q9GZK6 312 aa12.9□□□□□ -0.34
SHC1-205ENST00000368453 A0A0G2JRQ6 117 aa12.9□□□□□ -0.35
SHC1-205ENST00000368453 CCL5P13501 91 aa12.9□□□□□ -0.35
SHC1-205ENST00000368453 BRS3P32247 399 aa12.9□□□□□ -0.35
SHC1-205ENST00000368453 DEFB119Q8N690 84 aa12.9□□□□□ -0.35
SHC1-205ENST00000368453 ARL6IP6Q8N6S5 226 aa12.9□□□□□ -0.35
SHC1-205ENST00000368453 PLPPR1Q8TBJ4 325 aa12.9□□□□□ -0.35
SHC1-205ENST00000368453 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms