RNA–Protein interactions for RNA: ENST00000368409.7

EFNA4-202, Transcript of ephrin A4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFNA4, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-202ENST00000368409 ZNF695Q8IW36 515 aa12.93□□□□□ -0.34
EFNA4-202ENST00000368409 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
EFNA4-202ENST00000368409 OR52I1Q8NGK6 324 aa12.93□□□□□ -0.34
EFNA4-202ENST00000368409 Q96MT0 163 aa12.93□□□□□ -0.34
EFNA4-202ENST00000368409 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
EFNA4-202ENST00000368409 MRPS18AQ9NVS2 196 aaKnown RBP12.93□□□□□ -0.34
EFNA4-202ENST00000368409 ST3GAL6Q9Y274 331 aa12.93□□□□□ -0.34
EFNA4-202ENST00000368409 LINC01548A6NM66 108 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 CCRL2O00421 344 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 CDRT1O95170 752 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 GAPDHP04406 335 aaKnown RBP12.92□□□□□ -0.34
EFNA4-202ENST00000368409 LIMS3P0CW19 117 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 LIMS4P0CW20 117 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 GPR12P47775 334 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 SOX2P48431 317 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 GTF2A1P52655 376 aaPredicted RBP12.92□□□□□ -0.34
EFNA4-202ENST00000368409 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 TMEM104Q8NE00 496 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 OR52M1Q8NGK5 317 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 RAX2Q96IS3 184 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 EAF1Q96JC9 268 aaPredicted RBP12.92□□□□□ -0.34
EFNA4-202ENST00000368409 LIN7CQ9NUP9 197 aaKnown RBP12.92□□□□□ -0.34
EFNA4-202ENST00000368409 FAM118AQ9NWS6 357 aa12.92□□□□□ -0.34
EFNA4-202ENST00000368409 TMEM30CPA0ZSE6 113 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 C15orf65H3BRN8 121 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 AP4M1O00189 453 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 OR7C1O76099 320 aaPredicted RBP12.91□□□□□ -0.34
EFNA4-202ENST00000368409 HTR3BO95264 441 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 CD2P06729 351 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 GZMHP20718 246 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 REG1BP48304 166 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 XAF1Q6GPH4 301 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 MOB3BQ86TA1 216 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 LINC00596Q86U02 117 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 Q8N9W7 124 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 ST6GALNAC6Q969X2 333 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 TMEM106AQ96A25 262 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 WWC2-AS2Q96NR7 200 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 ABCG5Q9H222 651 aa12.91□□□□□ -0.34
EFNA4-202ENST00000368409 ZMAT5Q9UDW3 170 aaKnown RBP12.91□□□□□ -0.34
EFNA4-202ENST00000368409 IGHV3-72A0A0B4J1Y9 119 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 ANKRD65E5RJM6 399 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 SDCBPO00560 298 aaPredicted RBP12.9□□□□□ -0.34
EFNA4-202ENST00000368409 GEMIN2O14893 280 aaKnown RBP12.9□□□□□ -0.34
EFNA4-202ENST00000368409 DGCR2P98153 550 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 CCDC58Q4VC31 144 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 UNQ9370/PRO34162Q6UXP9 181 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 RNF152Q8N8N0 203 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 OR52N1Q8NH53 320 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 APH1BQ8WW43 257 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 RTN4IP1Q8WWV3 396 aaPredicted RBP12.9□□□□□ -0.34
EFNA4-202ENST00000368409 LYSTQ99698 3801 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 METTL9Q9H1A3 318 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 TMEM138Q9NPI0 162 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 PLSCR3Q9NRY6 295 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 GFOD1Q9NXC2 390 aa12.9□□□□□ -0.34
EFNA4-202ENST00000368409 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
EFNA4-202ENST00000368409 NCBP2LA6PVI3 153 aaKnown RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 CCL24O00175 119 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 ORC5O43913 435 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 RPLP1P05386 114 aaKnown RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 VSIG8P0DPA2 414 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 ZNF93P35789 620 aaPredicted RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 GP2P55259 537 aaKnown RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 PPP3R1P63098 170 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 DDI2Q5TDH0 399 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 RPL22L1Q6P5R6 122 aaKnown RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 ZNF497Q6ZNH5 498 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 OR8U1Q8NH10 309 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 GON7Q9BXV9 100 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 DCLRE1BQ9H816 532 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 PAK1IP1Q9NWT1 392 aaPredicted RBP12.89□□□□□ -0.35
EFNA4-202ENST00000368409 ING4Q9UNL4 249 aa12.89□□□□□ -0.35
EFNA4-202ENST00000368409 CSTBP04080 98 aaKnown RBP12.88□□□□□ -0.35
EFNA4-202ENST00000368409 SERPINA2P20848 420 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 CD1BP29016 333 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 ZNF137PP52743 207 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 CFHR3Q02985 330 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 FOXE3Q13461 319 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 GPR50Q13585 617 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 DEFB136Q30KP8 78 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 Q3ZCU0 254 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 FAM53AQ6NSI3 398 aaPredicted RBP12.88□□□□□ -0.35
EFNA4-202ENST00000368409 FAM71E2Q8N5Q1 922 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 SLC29A1Q99808 456 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 C9orf16Q9BUW7 83 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
EFNA4-202ENST00000368409 IGHV3-43A0A0B4J1X8 118 aa12.87□□□□□ -0.35
EFNA4-202ENST00000368409 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms