RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RAB35Q15286 201 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 OR8G1Q15617 311 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 OR1C1Q15619 314 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 EXT1Q16394 746 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 ZNF506Q5JVG8 444 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 C6orf201Q7Z4U5 140 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 FOXRED2Q8IWF2 684 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 OR2C3Q8N628 320 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 OR14L1PQ8NHC6 308 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 IL22RA2Q969J5 263 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 NABP1Q96AH0 204 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 ZNF799Q96GE5 643 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 SMIM3Q9BZL3 60 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 PLEKHF2Q9H8W4 249 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 SLC2A9Q9NRM0 540 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 AK3Q9UIJ7 227 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 ZDHHC8Q9ULC8 765 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 PIGLQ9Y2B2 252 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 RCL1Q9Y2P8 373 aaKnown RBP9.9□□□□□ -0.82
USF1-201ENST00000368019 NF1P21359 2839 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 EML6Q6ZMW3 1958 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 TRBV11-1A0A0K0K1C0 115 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 FAM230AA0A1W2PPH8 454 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 RBFOX3A6NFN3 312 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 TRDCB7Z8K6 153 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 DHHO43323 396 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 SP1P08047 785 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 SRP19P09132 144 aaKnown RBP9.89□□□□□ -0.83
USF1-201ENST00000368019 FAHP16930 419 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 CRYGSP22914 178 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 CDAP32320 146 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 MTCP1P56278 107 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 KRTAP27-1Q3LI81 207 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 TMEM176BQ3YBM2 270 aaPredicted RBP9.89□□□□□ -0.83
USF1-201ENST00000368019 FAM27BQ5VT28 67 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 SPINK14Q6IE38 97 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 SLC35E3Q7Z769 313 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 FAM24BQ8N5W8 94 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 Q8NFD4 153 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 TMEM56Q96MV1 263 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 METTL7AQ9H8H3 244 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 PARPBPQ9NWS1 579 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 DKKL1Q9UK85 242 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 TMEM56-RWDD3S4R434 201 aa9.89□□□□□ -0.83
USF1-201ENST00000368019 MAP1AP78559 2803 aaPredicted RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 KIAA1549Q9HCM3 1950 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 hCG_1809904A0A1W2PP81 198 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 A0A1W2PPE2 198 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 A0A1W2PR64 198 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 A0A1W2PRV1 198 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 ZNF850A8MQ14 1090 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 TP53I11O14683 189 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 MSTNO14793 375 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 CLDN14O95500 239 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 IFNA10P01566 189 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 CD46P15529 392 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 NQO2P16083 231 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 GABRR1P24046 479 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 S100A2P29034 98 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 CLDN17P56750 224 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 KRTAP10-9P60411 292 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 HERV-K104P61576 105 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 PNRC1Q12796 327 aaPredicted RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 TESK1Q15569 626 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 KHDC3LQ587J8 217 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 ZNF468Q5VIY5 522 aaPredicted RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 ADAM5Q6NVV9 412 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 SPSB3Q6PJ21 355 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 GALNTL5Q7Z4T8 443 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 LYZL2Q7Z4W2 148 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 TMEM123Q8N131 208 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 FBXL14Q8N1E6 418 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 TMEM178AQ8NBL3 297 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 MAFIPQ8WZ33 124 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 SPACA9Q96E40 222 aaPredicted RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 TVP23CQ96ET8 276 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 SF3B5Q9BWJ5 86 aaKnown RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 LYRM2Q9NU23 88 aaPredicted RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 TMEM242Q9NWH2 141 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 MYOTQ9UBF9 498 aa9.88□□□□□ -0.83
USF1-201ENST00000368019 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
USF1-201ENST00000368019 ITPR3Q14573 2671 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 TRAV20A0A0B4J274 112 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 E9PLN8 166 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 ZNHIT1O43257 154 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 PDCD6O75340 191 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 CST2P09228 141 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 SLC25A6P12236 298 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 CBR1P16152 277 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 ATP6V0CP27449 155 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 NKX2-1P43699 371 aaPredicted RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 RBP2P50120 134 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 RND2P52198 227 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 SSTP61278 116 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 FOXO1Q12778 655 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 IL24Q13007 206 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 KIAA0141Q14154 515 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms