RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 FAM106CPP0CH98 169 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GTF2F2P13984 249 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 LOXL3P58215 753 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TAS2R43P59537 309 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MADCAM1Q13477 382 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 EBI3Q14213 229 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 C8orf59Q8N0T1 100 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 LINC00311Q8N616 119 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 NANOGP1Q8N7R0 232 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 C8orf31Q8N9H6 132 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR52M1Q8NGK5 317 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TFAP2CQ92754 450 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TOMM40LQ969M1 308 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RPEQ96AT9 228 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 R3HDM4Q96D70 268 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MRPS24Q96EL2 167 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 DERL3Q96Q80 235 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 NOTCH3Q9UM47 2321 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 A0A1W2PPK0 400 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TMEM30CPA0ZSE6 113 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SH2D7A6NKC9 451 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 M0QZK8 103 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SNRNP70P08621 437 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RAB7AP51149 207 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GP2P55259 537 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 WNT4P56705 351 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZNF816Q0VGE8 651 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GPR176Q14439 515 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SLC22A6Q4U2R8 563 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ARSJQ5FYB0 599 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RNLSQ5VYX0 342 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 C10orf99Q6UWK7 81 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR8H3Q8N146 312 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 DRAM1Q8N682 238 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CAPSLQ8WWF8 208 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MUL1Q969V5 352 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ST6GALNAC6Q969X2 333 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 S100A13Q99584 98 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CKLFQ9UBR5 152 aa10.85□□□□□ -0.67
TNFRSF1A-202ENST00000366159 A0A1W2PPE3 182 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SC5DO75845 299 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CELP19835 753 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GNG10P50151 68 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 LTC4SQ16873 150 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 Q3ZCU0 254 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OXLD1Q5BKU9 147 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ATAD3CQ5T2N8 411 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FAM53AQ6NSI3 398 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GLIPR1L1Q6UWM5 242 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 UNQ9370/PRO34162Q6UXP9 181 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 AHSA2Q719I0 299 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CENPVQ7Z7K6 275 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 C5orf56Q8N8D9 126 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR56B4Q8NH76 319 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GFOD1Q9NXC2 390 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MRPS28Q9Y2Q9 187 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FAM90A10PA6NDY2 464 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FAM90A7PA6NKC0 464 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FAM90A23PA8MXZ1 464 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FGF16O43320 207 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MAS1P04201 325 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CD37P11049 281 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SIGIRRQ6IA17 410 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 STX19Q8N4C7 294 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 Q8N6K4 173 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZNF439Q8NDP4 499 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TMEM104Q8NE00 496 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 BPIFB6Q8NFQ5 453 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MYDGFQ969H8 173 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ARL11Q969Q4 196 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 Q96M66 194 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SPACA1Q9HBV2 294 aa10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-202ENST00000366159 IGHV1-3A0A0C4DH29 117 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 C12orf77C9JDV5 145 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 AIPO00170 330 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 HSD17B6O14756 317 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MYL12BO14950 172 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 GLAP06280 429 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ZNF134P52741 427 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ZNF137PP52743 207 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 JAGN1Q8N5M9 183 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 OR10X1Q8NGY0 326 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 UBALD1Q8TB05 177 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CCDC107Q8WV48 283 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 UQCC2Q9BRT2 126 aa10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 LSM2Q9Y333 95 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TCRBV4S1A1TA0A5B7 111 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MCRIP1C9JLW8 97 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ANKRD65E5RJM6 399 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SDCBPO00560 298 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGKV1D-33P01593 117 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGKV1-33P01594 117 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGHG2P01859 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms