RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 USF3Q68DE3 2245 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 IGHV2-70P01814 119 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 CST2P09228 141 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 MMP9P14780 707 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 ZFP36L1Q07352 338 aaKnown RBP9.05□□□□□ -0.96
SMC3-201ENST00000361804 HMGN3Q15651 99 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 GPR61Q9BZJ8 451 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 WSB1Q9Y6I7 421 aa9.05□□□□□ -0.96
SMC3-201ENST00000361804 CBR3O75828 277 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 PSG2P11465 335 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 DEFA4P12838 97 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 NR2C1P13056 603 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 ZNF16P17020 682 aaPredicted RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 CXCL12P48061 93 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 S100A12P80511 92 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 ARL16Q0P5N6 197 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 PRDX4Q13162 271 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 RHEBQ15382 184 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 LPAL2Q16609 132 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 UNQ6494/PRO21346Q6UXR6 183 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 ASCL4Q6XD76 172 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 LYRM2Q9NU23 88 aaPredicted RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 ZNF816-ZNF321PA0A0X1KG74 233 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 LRRC3CA6NJW4 275 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 ZNF732B4DXR9 585 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 SCAF4O95104 1147 aaKnown RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 KLK3P07288 261 aaPredicted RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 GDF1P27539 372 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 RAB11AP62491 216 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 RPL23AP62750 156 aaKnown RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 IL22RA1Q8N6P7 574 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 TACC2O95359 2948 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 LOC102723996A0A087X1L8 192 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 TOX3O15405 576 aaPredicted RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 SOD3P08294 240 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 HOXA6P31267 233 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 ARF1P84077 181 aaKnown RBP9.04□□□□□ -0.96
SMC3-201ENST00000361804 BEND4Q6ZU67 534 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 CMTM1Q8IZ96 169 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 TCTEX1D2Q8WW35 142 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 OR51M1Q9H341 326 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 PLEKHF2Q9H8W4 249 aa9.04□□□□□ -0.96
SMC3-201ENST00000361804 RHBDL1O75783 438 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 TK1P04183 234 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 METTL15P1P0C7V9 234 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 MLF1P58340 268 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIKESHIQ53FT3 197 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 NMSQ5H8A3 153 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 OR2B11Q5JQS5 317 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 ZNF880Q6PDB4 577 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 TUBA4BQ9H853 241 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 Q9N2K0 584 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 LRBAP50851 2863 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 A0A087WZY1 265 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 RPL36A-HNRNPH2H7BZ11 118 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BKO60814 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 PITX3O75364 302 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BJP06899 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 CD55P08174 381 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 MMP7P09237 267 aaPredicted RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BOP23527 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BBP33778 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BDP58876 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BCP62807 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST2H2BEQ16778 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 ZNF383Q8NA42 475 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BHQ93079 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 C10orf35Q96D05 121 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BNQ99877 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HIST1H2BMQ99879 126 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 SPRY4Q9C004 299 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 TOLLIPQ9H0E2 274 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 TFF1P04155 84 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 ELLP55199 621 aaPredicted RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 OR8B8Q15620 311 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 AKR1C8PQ5T2L2 129 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 ERRFI1Q9UJM3 462 aaPredicted RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 PPP1R3CQ9UQK1 317 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 CDS2O95674 445 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 P04436 131 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 ZNF266Q14584 549 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 TMEM211Q6ICI0 200 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 TUSC5Q8IXB3 177 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 COMMD1Q8N668 190 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 CLDND2Q8NHS1 167 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 CPT1CQ8TCG5 803 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 GPR146Q96CH1 333 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 RBMXL1Q96E39 390 aaKnown RBP9.03□□□□□ -0.96
SMC3-201ENST00000361804 SIT1Q9Y3P8 196 aa9.03□□□□□ -0.96
SMC3-201ENST00000361804 PGLYRP1O75594 196 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms