RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 NAT2P11245 290 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 PPP1CCP36873 323 aaKnown RBP11.96□□□□□ -0.49
CTR9-201ENST00000361367 CSN1S1P47710 185 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 ST8SIA2Q92186 375 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 PPP1R3EQ9H7J1 279 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 CACNA1DQ01668 2161 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 TICRRQ7Z2Z1 1910 aa11.96□□□□□ -0.49
CTR9-201ENST00000361367 CRYM-AS1A6NIL9 109 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 MGST1P10620 155 aaKnown RBP11.96□□□□□ -0.5
CTR9-201ENST00000361367 OPRK1P41145 380 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 AVPI1Q5T686 147 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 NSUN5P2Q63ZY6 315 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 UNQ9370/PRO34162Q6UXP9 181 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 OR13D1Q8NGV5 346 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 F2RL2O00254 374 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 MPC2O95563 127 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 CECR9P0C854 216 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 OR13C7P0DN81 318 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 MPPED2Q15777 294 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 PCGF1Q9BSM1 259 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 PRR13Q9NZ81 148 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.5
CTR9-201ENST00000361367 HLA-DQB1P01920 261 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 OR10J4P0C629 311 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 GLRXP35754 106 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 ADIRFQ15847 76 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 HAGHQ16775 308 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 SPINK9Q5DT21 86 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 ETV3LQ6ZN32 361 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 NEIL1Q96FI4 390 aaPredicted RBP11.95□□□□□ -0.5
CTR9-201ENST00000361367 MYO7BQ6PIF6 2116 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 A0A1W2PN81 502 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 COX7A2P2O60397 106 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 KLK2P20151 261 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 CHRNA7P36544 502 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 MPV17P39210 176 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 ABLIM2Q6H8Q1 611 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 TMEM123Q8N131 208 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 ZNF680Q8NEM1 530 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 C1orf162Q8NEQ5 155 aaPredicted RBP11.95□□□□□ -0.5
CTR9-201ENST00000361367 MISP3Q96FF7 219 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 M0QZ24 198 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 UBE2G1P62253 170 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 TMEM267Q0VDI3 215 aaPredicted RBP11.95□□□□□ -0.5
CTR9-201ENST00000361367 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 OR2C3Q8N628 320 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 PARD6AQ9NPB6 346 aa11.95□□□□□ -0.5
CTR9-201ENST00000361367 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 TAGLNQ01995 201 aaKnown RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 TNXAQ16473 311 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 MOGAT2Q3SYC2 334 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 MUC15Q8N387 334 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 C1RLQ9NZP8 487 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 ANAPC1Q9H1A4 1944 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 CD37P11049 281 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTR9-201ENST00000361367 SLC38A11Q08AI6 406 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 EXOSC2Q13868 293 aaKnown RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 BCL2L2Q92843 193 aaPredicted RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 NTNG2Q96CW9 530 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 NPAS1Q99742 590 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 SEBOXQ9HB31 216 aaPredicted RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 A0A1W2PPE3 182 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM24AA6NFZ4 105 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 LYPD3O95274 346 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 METTL15P1P0C7V9 234 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 RRASP10301 218 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 SLC25A42Q86VD7 318 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 C15orf54Q8N8G6 183 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 ZBTB34Q8NCN2 500 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 OR5C1Q8NGR4 320 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 MARS2Q96GW9 593 aaKnown RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 NEURL2Q9BR09 285 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 SOX7Q9BT81 388 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 NXF2Q9GZY0 626 aaKnown RBP11.94□□□□□ -0.5
CTR9-201ENST00000361367 PLXNA4Q9HCM2 1894 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 THYN1Q9P016 225 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A10PA6NDY2 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A8PA6NJQ4 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A7PA6NKC0 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A23PA8MXZ1 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 RBP4P02753 201 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
CTR9-201ENST00000361367 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms