RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 ZNF665Q9H7R5 613 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 SIRT4Q9Y6E7 314 aaPredicted RBP11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 CCL2P13500 99 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 TMEM211Q6ICI0 200 aa11.78□□□□□ -0.52
CCDC144A-203ENST00000360495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 PRRG2O14669 202 aa11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 HLA-DQA1P01909 254 aa11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 MGPP08493 103 aa11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 WNT5AP41221 380 aa11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 RBM14Q96PK6 669 aaKnown RBP11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 THYN1Q9P016 225 aa11.77□□□□□ -0.52
CCDC144A-203ENST00000360495 DHRS7CA6NNS2 312 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 LINC00587B1AMM8 73 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 HLA-DQB1P01920 261 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 TNXAQ16473 311 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 OR13G1Q8NGZ3 307 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 MRGPRX1Q96LB2 322 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 PARLQ9H300 379 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 MYOZ1Q9NP98 299 aaPredicted RBP11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 FZR1Q9UM11 496 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 OR2W1Q9Y3N9 320 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 COX6CP09669 75 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 VSTM2AQ8TAG5 236 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 RARRES2Q99969 163 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 CTSVO60911 334 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 ACER2Q5QJU3 275 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 LINC01555Q8NAE3 123 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
CCDC144A-203ENST00000360495 CT62P0C5K7 136 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 EID2BQ96D98 161 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 MMP17Q9ULZ9 603 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 NPBWR2P48146 333 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 SLC23A3Q6PIS1 610 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 C10orf35Q96D05 121 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 GNRHR2Q96P88 292 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 CLN8Q9UBY8 286 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 KCNE5Q9UJ90 142 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 BRWD1Q9NSI6 2320 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 HKR1P10072 659 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 FOLR2P14207 255 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 ADIPOQQ15848 244 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 IBA57Q5T440 356 aaKnown RBP11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 FAM131CQ96AQ9 280 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 PRF1P14222 555 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 CCR5P51681 352 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 PIGYQ3MUY2 71 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 TMEM136Q6ZRR5 245 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 ATOH7Q8N100 152 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 HIST1H4GQ99525 98 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 SIT1Q9Y3P8 196 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 RGPD8O14715 1765 aaPredicted RBP11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 OR6X1Q8NH79 312 aa11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 HDHD3Q9BSH5 251 aaPredicted RBP11.76□□□□□ -0.53
CCDC144A-203ENST00000360495 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 A8MWL6 223 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 MT-CO3P00414 261 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 ID4P47928 161 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 PPP1CAP62136 330 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 PTX4Q96A99 478 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 P2RX4Q99571 388 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 CDX2Q99626 313 aaPredicted RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 PPIL1Q9Y3C6 166 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 CHD4Q14839 1912 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 LINC01387J3KSC0 135 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 RND3P61587 244 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 ELSPBP1Q96BH3 223 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 GPA33Q99795 319 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 MRPS18BQ9Y676 258 aaKnown RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 SPINK2P20155 84 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 ATG4DQ86TL0 474 aaPredicted RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 OPN3Q9H1Y3 402 aaPredicted RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 KBTBD11O94819 623 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 BTF3P20290 206 aaKnown RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 PPP1CCP36873 323 aaKnown RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 ZNF506Q5JVG8 444 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 VAX1Q5SQQ9 334 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 C1QL3Q5VWW1 255 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 ERASQ7Z444 233 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 IP6K3Q96PC2 410 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 AQP10Q96PS8 301 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 CCL27Q9Y4X3 112 aa11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 SOX21Q9Y651 276 aaPredicted RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 ASCC3Q8N3C0 2202 aaKnown RBP11.75□□□□□ -0.53
CCDC144A-203ENST00000360495 NUP205Q92621 2012 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 H2BFSP57053 126 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms