RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ZNF154Q13106 437 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 WDR25Q64LD2 544 aaPredicted RBP12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 SFTPA2Q8IWL1 248 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ODF3L1Q8IXM7 274 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 SLC25A45Q8N413 288 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 C17orf78Q8N4C9 275 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 OR51G1Q8NGK1 321 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 LYZL4Q96KX0 146 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 NUDT22Q9BRQ3 303 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 PRSS50Q9UI38 385 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 A0A0U1RQV5 110 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 NPSP0C0P6 89 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 FAHP16930 419 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CDAP32320 146 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 ERVS71-1P61550 626 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 KCNMB1Q16558 191 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 BTNL3Q6UXE8 466 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 GBGT1Q8N5D6 347 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 SAP25Q8TEE9 199 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 THOC3Q96J01 351 aaKnown RBP12.87□□□□□ -0.35
UBAP1-202ENST00000359544 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 NAGKQ9UJ70 344 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
UBAP1-202ENST00000359544 MRPS18CQ9Y3D5 142 aaKnown RBP12.87□□□□□ -0.35
UBAP1-202ENST00000359544 ARHGEF17Q96PE2 2063 aaPredicted RBP12.87□□□□□ -0.35
UBAP1-202ENST00000359544 LIPT2A6NK58 231 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CEBPZOSA8MTT3 80 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 HRASP01112 189 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CD55P08174 381 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CTSSP25774 331 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 YPEL5P62699 121 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 TMEM241Q24JQ0 296 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CXorf66Q5JRM2 361 aaPredicted RBP12.87□□□□□ -0.35
UBAP1-202ENST00000359544 CENPVQ7Z7K6 275 aaPredicted RBP12.87□□□□□ -0.35
UBAP1-202ENST00000359544 NECAP1Q8NC96 275 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 COPS7AQ9UBW8 275 aa12.87□□□□□ -0.35
UBAP1-202ENST00000359544 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 ADAM20O43506 726 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 AADACP22760 399 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
UBAP1-202ENST00000359544 RPL29P47914 159 aaKnown RBP12.86□□□□□ -0.35
UBAP1-202ENST00000359544 ID3Q02535 119 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 PRDX4Q13162 271 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 DEFB133Q30KQ1 61 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 BSXQ3C1V8 233 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 SLC25A47Q6Q0C1 308 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 CISD2Q8N5K1 135 aaKnown RBP12.86□□□□□ -0.35
UBAP1-202ENST00000359544 LMX1AQ8TE12 382 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 PIGLQ9Y2B2 252 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 AKAP13Q12802 2813 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 OR8B8Q15620 311 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 LCN15Q6UWW0 184 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 ZNF705AQ6ZN79 300 aaPredicted RBP12.86□□□□□ -0.35
UBAP1-202ENST00000359544 SELENOHQ8IZQ5 122 aaKnown RBP12.86□□□□□ -0.35
UBAP1-202ENST00000359544 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
UBAP1-202ENST00000359544 ZNF160Q9HCG1 818 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 RPRMQ9NS64 109 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 GPR27Q9NS67 375 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 B3GAT1Q9P2W7 334 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 FUT9Q9Y231 359 aa12.86□□□□□ -0.35
UBAP1-202ENST00000359544 IGKV3D-11A0A0A0MRZ8 115 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 E9PLN8 166 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 JMJD7P0C870 316 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 GZMHP20718 246 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 MRPS11P82912 194 aaKnown RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 EXT1Q16394 746 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 ANAPC16Q96DE5 110 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 PCNX3Q9H6A9 2034 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 COL5A1P20908 1838 aaPredicted RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 KBTBD11O94819 623 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 PPYP01298 95 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 TYMSP04818 313 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 SPINK2P20155 84 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 CNN1P51911 297 aaKnown RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 ELLP55199 621 aaPredicted RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 SUMO3P55854 103 aaPredicted RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 MRPS34P82930 218 aaKnown RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 Q6ZSR3 168 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 PRR18Q8N4B5 295 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 SPSB1Q96BD6 273 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 PCGF1Q9BSM1 259 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
UBAP1-202ENST00000359544 OR51I2Q9H344 312 aa12.85□□□□□ -0.35
UBAP1-202ENST00000359544 CHST1O43916 411 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 PIAS2O75928 621 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 TMEM50AO95807 157 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 VDAC1P21796 283 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 MSX1P28360 303 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 SRP14P37108 136 aaKnown RBP12.84□□□□□ -0.35
UBAP1-202ENST00000359544 NPBWR2P48146 333 aa12.84□□□□□ -0.35
UBAP1-202ENST00000359544 PIP4P1Q86T03 277 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms